FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate1Col9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate1Col9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCAATAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.5No Hit
AGGCTTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
ACAGTTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
CTGCCTGTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.5No Hit
ATGAGGTCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACGAAA12.5No Hit
CGATCAGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
CTCCTCAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
CATACGGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
AAGAACGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
TCCCACTAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGA12.5No Hit
AGTCTCTGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGATTGCCCTCA12.5No Hit
ACGGCCACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
GAGCTGATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
CAGGCCCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
CTGGGACGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
GATGGGTCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
GTTTGAGTGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTTAGCCATGT12.5No Hit
TGCTTCTAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.5No Hit
AATCTCTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
TTTTTTGGAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGA12.5No Hit
TGGCCCGTCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCA12.5No Hit
CTCCCGTTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.5No Hit
CAGCGCAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTTAGCCATGT12.5No Hit
AGCATACGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
TGTTTCTTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATA12.5No Hit
GTAATTCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.5No Hit
TAGTCCCACCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTT12.5No Hit
ATCCTATAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA12.5No Hit
AAAAAATGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
AGATGGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
AGTTGTCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
AATGGTTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGATTGCCCTCA12.5No Hit
ACGATTAAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.5No Hit
AGCTGTGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
CATAACCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
CGCGGACCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGGATCGTTAG12.5No Hit
CTATTATCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.5No Hit
GAGCCATGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit
AATCAGCCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCG12.5No Hit
ATTGGGCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.5No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)