FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate1Col7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate1Col7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTGACGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
TGTTGCCTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
AAGGTGCTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
GGAGCGAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
ATTTGCAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
ACCGGTTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
TTGGTTCTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
GGGTTTTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
AGTTGTCCGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.8181818181818181No Hit
AGGTTTGCGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.8181818181818181No Hit
TTGGATTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TACAGATACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTACATATA11.8181818181818181No Hit
CTACAATAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
CCGGGAGGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
CCAACGTCCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTTAGCCAT11.8181818181818181No Hit
TTGTATTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
AGGTACCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGAA11.8181818181818181No Hit
ACTAAACTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
CGACTCTACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACG11.8181818181818181No Hit
TCTTGCTGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.8181818181818181No Hit
ATCAGTGGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.8181818181818181No Hit
GGCTCAAGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
TTATTTTAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
GTCTGAGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGAA11.8181818181818181No Hit
TGTTCTGTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
TTGCAATTCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAA11.8181818181818181No Hit
CTGCGGCTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
ATTTTATTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
GAGTTTTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
GTTTCTGTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
TAATAAATGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
GCGTGTAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
GTGAGCGTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
TACTCGTCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATGTGGTG11.8181818181818181No Hit
AAATGGTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
TATGTTTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
CGTTGCTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
TACCAATAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
GTTTATAGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGAGGATCGTTAG11.8181818181818181No Hit
GCTTTTTGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
CTCATTACGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
TTTTTCGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
ACTCGTCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTTAGCC11.8181818181818181No Hit
AACTGCATGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
GGATACAAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
GGAGTGGTGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.8181818181818181No Hit
ATATCGGAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
TTATCCGAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACGAA11.8181818181818181No Hit
TATTTATCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
ATGCCTTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
TTTTTTTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.8181818181818181No Hit
TTGTGAGTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CCCAACCTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
GACAAACTGATGTACTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.8181818181818181No Hit
TGTCAGGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGAA11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)