FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate1Col6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate1Col6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCATCACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
TAACACGTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
CACGTATAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
TTTTCTCAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
TGTAGTAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.639344262295082No Hit
GGCTTGACGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
GATTTTTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
GACCCGTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.639344262295082No Hit
TTCTAATGCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
CGATGACTCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTT11.639344262295082No Hit
GCGGACATGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.639344262295082No Hit
CGATGAATAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT11.639344262295082No Hit
ATTTACCAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
CTTATACTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.639344262295082No Hit
TTCCCGAGCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
TATTTTTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
TTCGGAATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.639344262295082No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.639344262295082No Hit
TGAGGGAACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
TGAACTCACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAA11.639344262295082No Hit
GGTCTCGCAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
ATGCTGTCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
TTAGCCTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
TTGAAGTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
ACATTTTCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
GATCTCACGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
TAAACTGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGAA11.639344262295082No Hit
CCTGCGCGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
ATGTAATAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
GCAGTTAGCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
CCACATTTCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
CGGTATGCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.639344262295082No Hit
GAACATAAGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.639344262295082No Hit
CAGCAATGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
CTAAATTGAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
TGTCGAGGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.639344262295082No Hit
TGCTTACGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.639344262295082No Hit
TTTCAGCTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.639344262295082No Hit
CCCCCTTTCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAA11.639344262295082No Hit
TGTGGGGTGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA11.639344262295082No Hit
GTAGCCTCAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
TGAAAAATCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGA11.639344262295082No Hit
AGTTTCTTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT11.639344262295082No Hit
GTCTATTTCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
CTCATTGTCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
TCTTTTTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGA11.639344262295082No Hit
GCATTGGTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
GTTTGGATAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
CAACTGCGAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
CAGAAACCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.639344262295082No Hit
TGCACTCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGAA11.639344262295082No Hit
CTCACAGTGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.639344262295082No Hit
CCTATAGCCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGA11.639344262295082No Hit
ATGTACTCAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
CTTAGCTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA11.639344262295082No Hit
TAAGCCGCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
TCTGACCTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.639344262295082No Hit
TATTGCAACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA11.639344262295082No Hit
TTCATACAGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.639344262295082No Hit
TATGAGACGGTATCAAGGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.639344262295082No Hit
CTTGCACCCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTT11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)