FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate1Col4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate1Col4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATATTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCG14.3478260869565215No Hit
GTCCCCCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
ACGAACGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA14.3478260869565215No Hit
TAGGTTAAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA14.3478260869565215No Hit
GCAATGTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
AATATCTCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
TTCTGATGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG14.3478260869565215No Hit
ATACGAAGGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA14.3478260869565215No Hit
CGCTCGACAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCG14.3478260869565215No Hit
GCCCGCTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA14.3478260869565215No Hit
TGTGGCCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
ACACGGGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
TGACTATTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA14.3478260869565215No Hit
CTGAGCAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA14.3478260869565215No Hit
TTTGGTTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG14.3478260869565215No Hit
TCGACTCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGAT14.3478260869565215No Hit
GGTATAAAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
ACAACACCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
TTCCAGTAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCG14.3478260869565215No Hit
TGAGCGTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA14.3478260869565215No Hit
AGCAGGGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG14.3478260869565215No Hit
CATCGTAAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA14.3478260869565215No Hit
TAGGGGCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)