FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate1Col3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate1Col3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGTCTGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.571428571428571No Hit
AATATAATGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA13.571428571428571No Hit
TTGCCGTCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.571428571428571No Hit
TTACATTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA13.571428571428571No Hit
TACCTATAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA13.571428571428571No Hit
GATTGTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA13.571428571428571No Hit
CAGTATTAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG13.571428571428571No Hit
TGTAGAACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG13.571428571428571No Hit
CTCCATTAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.571428571428571No Hit
CATTTCGAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC13.571428571428571No Hit
TTACCAGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA13.571428571428571No Hit
ATGGTTTCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.571428571428571No Hit
CTATTCTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA13.571428571428571No Hit
TTCTTAGGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC13.571428571428571No Hit
TGTGGGCAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG13.571428571428571No Hit
GACTTCAAAAGGATTAGATACCCTGGTAGCCCACGAGACGCGTATACATC13.571428571428571No Hit
TCGAGGAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG13.571428571428571No Hit
AGTATTGGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.571428571428571No Hit
GATTCTTAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG13.571428571428571No Hit
TTATTCATAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATA13.571428571428571No Hit
ACGCTTCCAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATA13.571428571428571No Hit
TACGAGCAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG13.571428571428571No Hit
TACAACCCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.571428571428571No Hit
GCTGGTTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC13.571428571428571No Hit
TATAAATGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG13.571428571428571No Hit
ACTTACCCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA13.571428571428571No Hit
TCCTTCTTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG13.571428571428571No Hit
AACTAGCGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.571428571428571No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)