FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate1Col2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate1Col2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGTTGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CGGGGGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
AGAGAGGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
AACACTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA11.36986301369863No Hit
GGGAACGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CTCACTTGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TGATGTGGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG11.36986301369863No Hit
GGGCTCGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TAGATCAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TGCGATCAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG11.36986301369863No Hit
ATATGCGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CATCATCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
ATGAAGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CTGACTGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TGGTTCCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CCAATAGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GCTTAAATTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.36986301369863No Hit
CGTACAACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TCTTATAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG11.36986301369863No Hit
AGTTTAACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GGTCATATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.36986301369863No Hit
ACTTACTAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATA11.36986301369863No Hit
TAAGTACACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA11.36986301369863No Hit
TTGCACTGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CATTGATTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATA11.36986301369863No Hit
CGAGTCGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GTTACTCAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG11.36986301369863No Hit
ACCGTCGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GTCACTGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
ATAGGTTGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG11.36986301369863No Hit
CCTTACCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TTCTTCAGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG11.36986301369863No Hit
GGTTGCGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TGCTGTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
ATACCAAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TAATTCTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG11.36986301369863No Hit
TTGCCCAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TTGTATATGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG11.36986301369863No Hit
TCATACAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CTAGCACGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CTGAAGGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG11.36986301369863No Hit
GTTGTAACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
AGTATTGCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATA11.36986301369863No Hit
TTCATATCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CCCGCGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
ACGTCTTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CGTGCTCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
AGAGTGTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TGATACGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TTATACTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GCTATGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GGGGGTCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
AGTCTGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
ACATGTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CTAAACAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TAAGGGTGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
AGAAAAAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GTTTGATGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
AGTCCCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACGC11.36986301369863No Hit
TTCAGACCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GACCCATATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CCTCCTGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG11.36986301369863No Hit
AGGAAAAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CGTGGGATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GCCAAAATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CATGATATGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.36986301369863No Hit
ATCTTTAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TTATCCATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
GGTAACGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
CGTGGGCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
ACCGGGCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.36986301369863No Hit
TGACCGTAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG11.36986301369863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)