FastQCFastQC Report
Sat 29 Oct 2022
000000000-GB7NH_l01_n01_LH_221025.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GB7NH_l01_n01_LH_221025.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5024411
Sequences flagged as poor quality0
Sequence length301
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT167709733.37897715772058No Hit
CCCGTCGAGCTGCCAATTCTGACCGGTACAGTGGGTCCGGACGTGATCGA126080325.09354827859425No Hit
CCCGTCGAGCTGCCAATACTGACCGGTACAGTGGGTCCGGACGTGATCGA3365546.69837718291756No Hit
CCCGTCGAGCTGCCGGAAGATGGCCTTGAGCGTCTGCTGACCAAGCTCAA2720635.414823747499955No Hit
CCCGTCGAGCTGCCCAACACGCTGGGCATGGTCATGCACGCCGACGGCGG1355592.6980077863853094No Hit
CCCGTCGAGCTGCCCATCATGCAGCGCAGCCTGATCGACAATTTTTCCGA621311.2365827556702667No Hit
CCCGTCGAGCTGCCGTTGGCCCAGCGCATCTGGCAACTGAGCTGGGTGCG518851.0326583553773765No Hit
CCCGTCGAGCTGCCGGTTGGCGGTGTGATCCCGGGTTGGGTTGAAGGCCT268820.5350278868508169No Hit
CCCGTCGAGCTGCCGGGCAAGGTCTGGATTTCCCTGACTGTGTTGATCCA248350.49428679301912204No Hit
CCCGTCGAGCTGCCGATGTCGAACAGCAGCAGCAACTTGATAGTGTTGCG235330.46837330783648073No Hit
CCCGTCGAGCTGCCCGGCCATGCGGGACATGCGGCTCTCCAGCCAGTTGC225400.44860979724787636No Hit
CCCGTCGAGCTGCCGTCCTATGTCCGTCTGACCCGCGCTGCGGTGATGGG222240.44232050284102953No Hit
GATGAGTCAGCGTCGATTCGGCGCTGGTCTATCGCGACATGGACATCGGC220610.43907634148559904No Hit
GATGAGTCAGCGTCGAACTGCGCCACGTACAGCGTGCCGTGGTCCAGCAT211880.42170117054516437No Hit
CCCGTCGAGCTGCCGATTCTGACCGGTACAGTGGGTCCGGACGTGATCGA187910.3739940860729745No Hit
CCCGTCGAGCTGCCACACACGCCCAGCAATGGGCGGCTACCGGGGTGCCA168630.33562142905904796No Hit
CCCGTCGAGCTGCCGAGCTGCGCATCACCTGGACGCCCACAGCGTTGCTG168260.3348850243341956No Hit
CCCGTCGAGCTGCCCCTGACACAGCGCATCTGGCAACTGGGCTGGGTGCG157220.3129122995710343No Hit
GATGAGTCAGCGTCGCCCGGAACATTAGCCTTTTCGCTCGCAGAAATGCC115380.22963885717151722No Hit
CCCGTCGAGCTGCGTGGTTGCGAGCGCACCCGCGAGCTGATTGATGTCAA111460.22183694765416287No Hit
CCCGTCGAGCTGCACGCGCAGCACCTGGGTGTTGAGGAACGCGCCGATCA100590.2002025710078256No Hit
CCCGTCGAGCTGCCCATTTTAACTGGCACCGTGGGTCCCGATGTAATCGA93720.18652932652205403No Hit
CCCGTCGAGCTGCACACGCAGCACCTGGGTGTTGAGGAACGCGCCGATCA92440.183981764230673No Hit
CCCGTCGAGCTGCCAGATGCTGCCAATGACTGCCACTTTACTGCCAGAAA90790.18069779721443965No Hit
CCCGTCGAGCTGCCCATCATGCAACGCAGCCTGATCGACAATTTTTCCGA90350.17982207267677744No Hit
CCCGTCGAGCTGCCACGGCCTGAAACTCATCCACAACAACAGCCCCGGCA89200.1775332471806148No Hit
CCCGTCGAGCTGCCGACCTATGTCCGTCTGACCCGCGCTGCGGTGATGGG86770.17269685939307114No Hit
CCCGTCGAGCTGCCGATACTGACCGGTACAGTGGGTCCGGACGTGATCGA86700.17255753958026124No Hit
CCCGTCGAGCTGCCCTTTGTCAGCGGCATCATGCCGGAGTACCTGCGCTT84590.16835804236556284No Hit
CCCGTCGAGCTGCCAATACCCCGTGCGAGATCTGTCTCTTATACACATCT80960.1611333149298495No Hit
CCCGTCGAGCTGCCTAATGTGCATGCCCTGAACTTCGTGATCCCCGGCGT75760.15078384312111412No Hit
CCCGTCGAGCTGCCGACCCTGTGCAGAATGATTTCCTTGGTCGCGTTCAG73630.14654454024561286No Hit
CCCGTCGAGCTGCCGCGGTTCGCGCAGACTGCGCCGAATCCGGTGCAGTG73480.14624599778959166No Hit
CCCGTCGAGCTGCCCAACACGCTGGGCATGGTCATGCACGCTGACGGCGG73310.1459076496727676No Hit
CCCGTCGAGCTGCCATACACCTCGGCAATCGCACGCAGTTGAGCATGCGA69150.1376280722257793No Hit
CCCGTCGAGCTGCCGTTGGCCCAACGCATCTGGCAACTGAGCTGGGTGCG65920.1311994580061225No Hit
CCCGTCGAGCTGCCAATACGCCGTGCGAGATCTGTCTCTTATACACATCT58590.11661068332188589No Hit
CCCGTCGAGCTGCGCATCACCTGGACGCCCACAGCGTTGCTGCCGGTGAA57600.11464030311214587No Hit
CCCGTCGAGCTGCCGTGGGTGCGCTGATCACCATGCCCGAGTACGTGGAC56110.11167478138233515No Hit
CCCGTCGAGCTGCCGGGGTAATACAGGGACAGGTACGCACCGCCAATGCC55970.11139614175671537No Hit
CCCGTCGAGCTGCCGAAATGTTGCCACCAGCTGGCGTCGTTGCGCTGAGT55110.10968449834219375No Hit
CCCGTCGAGCTGCGTGGTTGCGAGCGCACCCGCGAGCTGATCGACGTCGT54360.10819178606208768No Hit
CCCGTCGCGCTGCCAATTCTGACCGGTACAGTGGGTCCGGACGTGATCGA52770.1050272360282628No Hit
CCCGTCGAGCTGCCAACACCCCGTGCGAGATCTGTCTCTTATACACATCT52180.10385296903457938No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)