Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 000000000-G9BKV_l01_n01_WGS20-1 000000000-G9BKV_l01_n01_WGS20-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 640180.0 0.0 28.0 43.0 5.3670842575525635 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G9BKV_l01_n01_WGS20-2 000000000-G9BKV_l01_n01_WGS20-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 703909.0 0.0 28.0 42.0 6.665350208620717 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G9BKV_l01_n01_WGS20-3 000000000-G9BKV_l01_n01_WGS20-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 711134.0 0.0 28.0 43.0 6.727283465563453 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G9BKV_l01_n01_WGS20-4 000000000-G9BKV_l01_n01_WGS20-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 747626.0 0.0 28.0 42.0 4.882788988076927 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G9BKV_l01_n01_WGS20-5 000000000-G9BKV_l01_n01_WGS20-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 406714.0 0.0 28.0 42.0 8.535481935709123 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G9BKV_l01_n01_WGS20-6 000000000-G9BKV_l01_n01_WGS20-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 1467225.0 0.0 28.0 44.0 6.960161860953192 28.0 pass pass pass pass fail warn pass pass fail fail pass 000000000-G9BKV_l01_n01_WGS20-7 000000000-G9BKV_l01_n01_WGS20-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 336536.0 0.0 28.0 45.0 5.324838947393444 28.0 pass pass pass pass fail pass pass pass fail warn pass 000000000-G9BKV_l01_n01_undetermined 000000000-G9BKV_l01_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 629636.0 0.0 28.0 44.0 9.89206462146383 28.0 pass pass pass pass warn pass pass pass fail fail pass 000000000-G9BKV_l01_n02_WGS20-1 000000000-G9BKV_l01_n02_WGS20-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 640180.0 0.0 287.0 50.0 4.833015714330345 287.0 pass pass warn pass fail fail pass pass fail fail fail 000000000-G9BKV_l01_n02_WGS20-2 000000000-G9BKV_l01_n02_WGS20-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 703909.0 0.0 287.0 50.0 3.006354514575037 287.0 pass pass warn pass fail fail pass pass fail fail fail 000000000-G9BKV_l01_n02_WGS20-3 000000000-G9BKV_l01_n02_WGS20-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 711134.0 0.0 287.0 50.0 2.4940447229354805 287.0 pass pass warn pass fail fail pass pass fail fail fail 000000000-G9BKV_l01_n02_WGS20-4 000000000-G9BKV_l01_n02_WGS20-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 747626.0 0.0 287.0 50.0 3.000831966785532 287.0 pass pass warn pass fail fail pass pass fail fail fail 000000000-G9BKV_l01_n02_WGS20-5 000000000-G9BKV_l01_n02_WGS20-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 406714.0 0.0 287.0 51.0 2.974325939112005 287.0 pass pass warn pass fail fail pass pass fail fail fail 000000000-G9BKV_l01_n02_WGS20-6 000000000-G9BKV_l01_n02_WGS20-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 1467225.0 0.0 287.0 50.0 8.088001643863763 287.0 pass pass warn pass fail fail pass pass fail fail fail 000000000-G9BKV_l01_n02_WGS20-7 000000000-G9BKV_l01_n02_WGS20-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 336536.0 0.0 287.0 40.0 51.679421063278994 287.0 pass warn warn pass fail fail pass pass warn fail fail 000000000-G9BKV_l01_n02_undetermined 000000000-G9BKV_l01_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 629636.0 0.0 287.0 45.0 8.248257723510092 287.0 pass pass warn pass pass fail pass pass fail fail warn