FastQCFastQC Report
Sat 2 Oct 2021
000000000-G9BKV_l01_n02_WGS20-5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G9BKV_l01_n02_WGS20-5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406714
Sequences flagged as poor quality0
Sequence length287
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT36618690.0352581912597No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT39220.9643139896831681No Hit
TGCAACACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT12720.3127504831404869No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACCTATGGGCGAG5500.13523016173527344No Hit
GGCGATACGACAGCAGATACTGCTGTCATGGGACTGCACGACAGTCGACT5000.12293651066843041No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)