FastQCFastQC Report
Sat 18 Dec 2021
000000000-G992J_l01_n02_WGS21-8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G992J_l01_n02_WGS21-8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476135
Sequences flagged as poor quality0
Sequence length287
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT36205376.03998865867874No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCTATGGGCGAGCGC129572.721287029938988No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGAGTATGGGACTACAGTCG106022.2266794081510497No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACC77401.6255893811629056No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT29930.6286032322765602No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACCTATGGGCGAG22560.47381519947073836No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGCTATGGGCGA22210.4664643430959707No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACTATGGGCGAGC18140.3809843846808153No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGAG17470.3669127453348315No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG16600.3486406166318376Illumina Single End PCR Primer 1 (100% over 50bp)
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTATGGA16180.33981958898211645No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCATAGACATCCCAT9640.20246358700788644No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATCTATGGGCGAGCGCTATGAGC8780.18440148277274301No Hit
TGCAACACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT7290.15310783706301784No Hit
TACAACTTGATGTTATGGATTTAGTTGATAAGAGATACTCCATTAAATTT5780.12139414241759165No Hit
GTTCCCCGATGTTAAGGTCGATCCCATCACCCAGGCCCCACAGTAGAGAT5680.11929389773908661No Hit
CCGCTATCGACAGCAGATACTGCTGTCATGGGACTGCACGACAGTCGACT5520.11593350625347854No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC5470.11488338391422602Illumina Single End PCR Primer 1 (100% over 50bp)
CCAGAGCGTCGCTGTCCGTGTGCTCCCGCAGGATTCGCAGGTGCGTGGCG4800.1008117445682422No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)