FastQCFastQC Report
Sat 18 Dec 2021
000000000-G992J_l01_n02_WGS21-7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G992J_l01_n02_WGS21-7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences586775
Sequences flagged as poor quality0
Sequence length287
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT31179053.13621064292106No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT22333738.06177836479059No Hit
CGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT7590.12935111414085468No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)