FastQCFastQC Report
Sat 18 Dec 2021
000000000-G992J_l01_n02_WGS21-6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G992J_l01_n02_WGS21-6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568699
Sequences flagged as poor quality0
Sequence length287
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT28379149.90179339158324No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGCTATGGCTATGGGACCTAT157452.7685999096182687No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGATCGACAAAT124042.1811186585522395No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGT105071.8475502858278279No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCTATGGGCGAGCGC59391.0443134241488028No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACACTATGGG50030.8797272370797206No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGCTATGGGCGA49190.8649566818299311No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT47460.8345363716131029No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAAC42070.7397586420936207No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTCTATGGGCGAGCGCT32480.5711281363251913No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCCTAT31740.5581159805099007No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCTATG28650.5037814379838895No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGCTATGG27900.49059344222514895No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACTATGGGCGAGC27600.4853182439216528No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGCG26960.4740644875408608No Hit
CCGCTATCGACAGCAGTATAACCAATGGGAGTCGAGTGCGACCCCTAAAG26360.46351409093386836No Hit
CCGCTACTATGGGCGAGCGCTATGAGCGACTATGGGACAGCAGTATCATC25340.4455784167019812No Hit
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG25220.44346833738058267Illumina Single End PCR Primer 1 (100% over 50bp)
CCGCTATCGACAGCAGTATCTGCTGTCATGGCTATGGGCGAGCGCTATGA25070.4408307382288346No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTCATGCAGTACATGTA24920.43819313907708646No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAAG23750.41761986569345116No Hit
CCGCTATCGACAGCAGCTATGGGAGAGCGCGCTCGTCGACTATGGGTCAG22440.3945848331015177No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATCTATGGGCGAGCGCTATGAGC20780.36539540248883856No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGCTA18470.32477637555191763No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTATGGG17950.3156326984925242No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACCTATGGGCGAG17940.3154568585490743No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACCTATGGGCGAGCGCTA15790.27765127070735135No Hit
CCGCTATCGACAGCAGTATCTGCTGTCAGTATGGGACTACAGTCGCTACG14880.2616498358534128No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGATG14180.24934103981192163No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACCTATGGGC13960.24547256105602436No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACA13610.23931816303527875No Hit
CCGCTATCGACAGCAGTATCTATGGGCGAGCGCTATGAGCGACTATGGGA13360.2349221644490319No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTATGGA13120.23070200580623496No Hit
CCGCTATCGACAGCAGTATCTGCTGTCACTATGGGCGAGCGCTATGAGCG12320.216634810330245No Hit
CCGCTATCGACAGCAGTATCTGCTGTCCTATGGGCGAGCGCTATGAGCGA11900.2092495327053503No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTATGGGCGAGCGCTAT11860.2085461729315508No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCCTATGGGCGAGCG11200.19694073666385908No Hit
CCGCTATCGACAGCAGTACTATGGGCGAGCGCTATGAGCGACTATGGGAC10930.19219305819071247No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGAGTATGGGACTACA10520.18498362050926764No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGCTATGGGCGAGCGCTATGAG8920.15684922955728778No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGC8580.15087067147999206No Hit
CCGCTATCGACAGCAGTATCTGCTGCTATGGGCGAGCGCTATGAGCGACT8380.14735387261099459No Hit
CCGCTATCGACAGCAGTATCTGCTATGGGCGAGCGCTATGAGCGACTATG8300.1459471530633956No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGCTATGGGCGAGCGCTATG8220.14454043351579657No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACG8040.14137531453369886No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGATA7940.1396169150992001No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC7170.12607723945355978Illumina Single End PCR Primer 1 (100% over 50bp)
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACCTATGGGA6930.12185708081076281No Hit
CCGCTATGAGCGACTATGGGACAGCAGTATCATCGACATCGAGTATGGGA6820.1199228414328142No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTAGTAT6550.11517516295966759No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAAT6550.11517516295966759No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACCTGCTATGAGC6480.11394428335551848No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGATC6470.1137684434120686No Hit
CCGCTATCGACAGCAGTATCTGCTGTCTATGGGCGAGCGCTATGAGCGAC6320.11113084426032048No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTACTATGGGCGAGCGC6190.10884492499547212No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGAG6170.10849324510857238No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGACTATGGGCGAGCGCTATG6010.10567980601337437No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)