FastQCFastQC Report
Sat 18 Dec 2021
000000000-G992J_l01_n02_WGS21-3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G992J_l01_n02_WGS21-3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences339381
Sequences flagged as poor quality0
Sequence length287
%GC46

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT14423642.499727444965984No Hit
CCGCTATCGACAGCAGTATCTGCTGTATATATATACGCTGCTCTTCTGCC129363.8116453189777864No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTCTATGGGCGAGCGCT32440.9558578706527472No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAAC31930.9408305120204137No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCTATGGGCGAGCGC31650.9325801974771717No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCCTAT25280.744885541618417No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACACTATGGG23880.7036339689022073No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACTGTATGGA21940.6464710752811736No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAAG20040.5904867980234604No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCCTATGGGCGAGCG19770.5825311375710485No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGCTATGG19230.5666198166662247No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATCTATGGGCGAGCGCTATGAGC19040.5610213889404534No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTATGGA18580.5474673007622701No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGCTATGGGCGA18470.5442261057631393No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCTATG18280.538627678037368No Hit
TACAACTTGATGTTATGGATTTAGTTGATAAGAGATACTCCATTAAATTT17920.5280201307674856No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGT17860.5262522062225051No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGCG17040.5020905707744393No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT16650.49059906123206665No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGC15770.46466950123902045No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGCTA15440.45494591624162817No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGCTATGGGCGAGCGCTATGA14440.4254805071586211No Hit
CCGCTATCGACAGCAGTATCTGCTGTCTATGGGCGAGCGCTATGAGCGAC12840.37833585262580993No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGATG12840.37833585262580993No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACTATGGGCGAGC11780.3471025189978225No Hit
CCAGAGCGTCGCTGTCCGTGTGCTCCCGCAGGATTCGCAGGTGCGTGGCG11570.340914783090391No Hit
GTTCCCCGATGTTAAGGTCGATCCCATCACCCAGGCCCCACAGTAGAGAT11560.34062012899956096No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACA11390.33561100945544975No Hit
CCGCTATCGACAGCAGTATCTATGGGCGAGCGCTATGAGCGACTATGGGA10950.3226462294589267No Hit
CCGCTATCGACAGCAGTATCTGCTGTCACTATGGGCGAGCGCTATGAGCG10740.31645849355149525No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGATA9710.286109122195998No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTATGGG9660.2846358517418477No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTATGGGCGAGCGCTAT8750.2578223294763113No Hit
CCGCTATCGACAGCAGTATCTGCTATGGGCGAGCGCTATGAGCGACTATG8620.25399182629552036No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGCTATGGGCGAGCGCTATG8480.2498666690238994No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGA7800.22983019084745465No Hit
CCTGCAAACGCTGAACGCCCTTAATATAAGTAAAATAAATGTAAAGCCGA7290.21480283221512103No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTATGGGCAAAGCGCCC6930.20419528494523853No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCCCAT6870.2024273604002581No Hit
AATCAGTATTGAATTTTTGAATAAATCATAAATTCATATACAAAGAAAAT6830.20124874403693785No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACCTATGGGCGAG6640.19565031631116647No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGACTATGGGCGAGCGCTATG6190.18239088222381333No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACG6150.18121226586049308No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACCTATGGGC5380.1585239008665777No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGATC5370.15822924677574762No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACCTATGGGA5330.1570506304124273No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGAAGTATGGGA5140.15145220268665602No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACCTATGGGCGAGCGCTA4760.14025534723511335No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACTATGGGTCAGC4570.134656919509342No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACGACTATGG4480.1320050326918714No Hit
CCGCTATCGACAGCAGTATCTGCTGTCCTATGGGCGAGCGCTATGAGCGA4450.13112107041938117No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACC4430.13053176223772103No Hit
CCGCTATCGACAGCAGTATCTATGGGTCAGCAGTACTACTGACGATGGGA4360.12846918360191054No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATACTATGGGCGAGCGCTATGAG4360.12846918360191054No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGCTATGGGCGAGCGCTATGAG4330.12758522132942032No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCTGTA4280.12611195087526997No Hit
CCGCTATCGACAGCAGTATCTGCTGTCTATGGGACAGCAGTATCACTATG4170.12287075587613921No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAACTATGG4130.12169213951281892No Hit
CCGCTATCGACAGCAGTATCTGCTGCTATGGGCGAGCGCTATGAGCGACT4070.1199242149678385No Hit
CCGCTATCGACAGCAGTATCTGCTGTATATATATACTCTGCTCTTCTGCC3910.11520974951455738No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGCTATGGGAGAGCGCGCTCGT3880.11432578724206717No Hit
ATCCAAGACGAAATTCCCCCAAAAGAAGTCCATTCAACTTGCTGCAATTA3750.11049528406127627No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTGCAGT3540.10430754815384478No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGAGTATGGATC3530.10401289406301473No Hit
TACAATTCCACAGATGCCTACCAAATAGTTTTATATAAATTTATATATTT3450.10165566133637416No Hit
CCGCTATCGACAGCAGTAGTATGGATCGACAAATGGCAGTATTCATCCAC3450.10165566133637416No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGAGTATGGGACTACA3400.10018239088222382No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)