FastQCFastQC Report
Sat 18 Dec 2021
000000000-G992J_l01_n02_WGS21-2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G992J_l01_n02_WGS21-2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences459020
Sequences flagged as poor quality0
Sequence length287
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT33465672.90662716221516No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGCTATGG140223.0547688553875645No Hit
CCGCTATCGACAGCAGTATCTGCTGTCAACTATGGGCGAGCGCTATGAGC125812.7408391791207354No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGAGTATGGATCGACAAATGGC93762.042612522330182No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGCG47851.042438237985273No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACCTATGGGCGAG45050.9814387172672214No Hit
CCGCTATCGACAGCAGTATCTGCTGTCACTATGGGCGAGCGCTATGAGCG41070.894732255675134No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGT18270.39802187268528605No Hit
CCGCTATCGACAGCAGTATCTATGGGCGAGCGCTATGAGCGACTATGGGA17510.3814648599189578No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT16180.3524900875778833No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATCTATGGGCGAGCGCTATGAGC13860.30194762755435495No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGAACTATGGAGTATGGATC13160.28669774737484205No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCTATG11140.24269095028539062No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACACTATGGG10450.22765892553701364No Hit
CCGTACAGTCGCTACGACTATGGGACAGAGATATCATGCAGTATGGATCG10090.2198161300161213No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACTATGGGCGAGC8810.1919306348307263No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAAC8360.18212714042961092No Hit
TATGGGCGAGCGCTATGAGCGACTAGTATGGGACTACAGTCGCTACGACT7780.1694915254237288No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACCTATGGGAGAG7560.16469870593873906No Hit
CCGCTATCGACAGCAGTACTACTGACGATGGGACAGCAGTCTGTATGGGA6930.15097381377717747No Hit
TACAACTTGATGTTATGGATTTAGTTGATAAGAGATACTCCATTAAATTT6470.14095246394492614No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGC6020.13114896954381075No Hit
CCGCTATCGACAGCAGTATCTGCTGTCAGTATGGATCGACAAATGGCAGT5770.12570258376541327No Hit
CCGCTATCGACAGCAGATACTGCTGTCATGGGACTGCACGACAGTCGACT5750.12526687290314148No Hit
CCGCTATCGACAGCAGTATCTGCTAAATATCTGCTAAACGCGTCATTAAA5320.11589908936429785No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATCTATGGGAGAGCGCGCTCGTC5150.11219554703498757No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGCTA4960.10805629384340552No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)