FastQCFastQC Report
Sat 18 Dec 2021
000000000-G992J_l01_n01_WGS21-3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G992J_l01_n01_WGS21-3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences339381
Sequences flagged as poor quality0
Sequence length28
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGGAATTACTGTGGATGAATACTGCCA4840.1426125799617539No Hit
ACGGTGTTGGTGTGGATGAATACTGCCA4650.13701415223598257No Hit
TTAATTCGGTTGTGGATGAATACTGCCA4610.13583553587266228No Hit
TTGCACGGGCTGTGGATGAATACTGCCA4440.1308264163285511No Hit
CATTCCGGTTTGGCTAGTTTGGTTCTAC4320.12729056723859025No Hit
AGGGATGTGTTGTGGATGAATACTGCCA3900.11491509542372733No Hit
GTTGTCCTGTTGTGGATGAATACTGCCA3880.11432578724206717No Hit
ACAGTTCATATGTGGATGAATACTGCCA3770.1110845922429364No Hit
TTTTTAGCGCTGTGGATGAATACTGCCA3720.10961132178878606No Hit
CGGCTGATTGTGTGGATGAATACTGCCA3650.10754874315297556No Hit
GCTAAGCTAGTGTGGATGAATACTGCCA3610.10637012678965528No Hit
GGCCGCAATGTGTGGATGAATACTGCCA3590.10578081860799515No Hit
TATATTAATGTGTGGATGAATACTGCCA3400.10018239088222382No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)