FastQCFastQC Report
Thu 20 Oct 2022
000000000-G98TK_l01_n01_LH_221014.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G98TK_l01_n01_LH_221014.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6481489
Sequences flagged as poor quality0
Sequence length301
%GC42

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT509430278.5977111123694No Hit
GATGAGTCAGCGTCGAACACGCAACATTTATTGCATGATACGTGGCATTT71355211.009075229472733No Hit
GATGAGTCAGCGTCGCACATGCAACATTTATTGCATGATACGTGGCATTT316080.48766572002205044No Hit
GATGAGTCAGCGTCGCCCGGAACATTAGCCTTTTCGCTCGCAGAAATGCC314310.48493486604698394No Hit
GCTGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT281590.4344526388920817No Hit
GATGAGTCAGCGTCGATTCGGCGCTGGTCTATCGCGACATGGACATCGGC243790.37613270654320324No Hit
GATGAGTCAGCGTCGAACTGCGCCACGTACAGCGTGCCGTGGTCCAGCAT228510.35255787674714867No Hit
GATGAGTCAGCGTCGCCAGTACGATCCAGAAGTCGCCTACCTTGAAGTGC153270.2364734399765239No Hit
GATGAGTCAGCGTCGCCCGGAACATTAGTCTTTTCGCTCGCAGAAATGCC129760.20020091062408654No Hit
GATGAGTCAGCGTCGAACATGCACCATTTATTGCATGATACGTGGCATTT95370.14714211502943228No Hit
GATGCGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT70110.10816958880899127No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)