FastQCFastQC Report
Thu 6 May 2021
000000000-G6GVD_l01_n02_WGS18-8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G6GVD_l01_n02_WGS18-8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454570
Sequences flagged as poor quality0
Sequence length287
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT28454662.59673977605209No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT10017822.03796994962272No Hit
TGCAACACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT11460.2521063862551422No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGC8970.19732934421541237No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCTATG8640.19006973623424334No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACATAGTCGG8370.18413005697692325No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGCG7400.16279120927469917No Hit
ACTACTTAGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT6770.1489319576742856No Hit
GTCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT6240.13727258728028685No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGATG6070.1335327892293816No Hit
CCAGAGCGTCGCTGTCCGTGTGCTCCCGCAGGATTCGCAGGTGCGTGGCG6040.13287282486745716No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGCTA6000.1319928723848912No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACA5870.12913302681655192No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)