FastQCFastQC Report
Thu 6 May 2021
000000000-G6GVD_l01_n02_WGS18-7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G6GVD_l01_n02_WGS18-7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences585556
Sequences flagged as poor quality0
Sequence length287
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT47685981.43695906113165No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT494018.436597012070578No Hit
TGCAACACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT14710.2512142305774341No Hit
GTCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT12180.20800743225242332No Hit
ACTACTTAGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT9080.15506629596486074No Hit
CCAGAGCGTCGCTGTCCGTGTGCTCCCGCAGGATTCGCAGGTGCGTGGCG8940.1526754059389708No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGCTATGG5940.1014420482413296No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)