FastQCFastQC Report
Thu 6 May 2021
000000000-G6GVD_l01_n01_WGS18-7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G6GVD_l01_n01_WGS18-7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences585556
Sequences flagged as poor quality0
Sequence length28
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGTGCCAAGGAACTCCAGTCACTATA7130.12176461346139396RNA PCR Primer, Index 43 (96% over 28bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)