FastQCFastQC Report
Tue 14 Sep 2021
000000000-G67TC_l01_n01_NGFR_LTA_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G67TC_l01_n01_NGFR_LTA_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7936
Sequences flagged as poor quality0
Sequence length300
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGGATTGAGAC738893.09475806451613No Hit
ACGATCGATAGGTAGGTCTTGTGGAAAGGACGAAACACCGGATTGAGACC320.4032258064516129No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAGGACGAAACACCGGATTGAGACC300.3780241935483871No Hit
ACGATCGATAGGTAAGGTCTGTGGAAAGGACGAAACACCGGATTGAGACC220.2772177419354839No Hit
ACGATCGATAGGTAAGTCTTGTGGAAAGGACGAAACACCGGATTGAGACC170.21421370967741934No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGACGAAACACCGGATTGAGACC130.16381048387096775No Hit
ACGATCGATAGTAAGGTCTTGTGGAAAGGACGAAACACCGGATTGAGACC120.15120967741935484No Hit
ACGATCGATAGGTAAGGTCTTGTGAAAGGACGAAACACCGGATTGAGACC120.15120967741935484No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGGCGAAACACCGGATTGAGAC100.12600806451612903No Hit
ACGATCGATAGGTAAGGTTTGTGGAAAGGACGAAACACCGGATTGAGACC90.11340725806451614No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACAAAACACCGGATTGAGAC90.11340725806451614No Hit
ACGATCGATAGGTAAGGTCTTGTAGAAAGGACGAAACACCGGATTGAGAC90.11340725806451614No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGGATTGAGCC80.10080645161290322No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAAACACCGATTGAGACC80.10080645161290322No Hit
ACGATCGATAGGTAAGGTCTTGTGGAAAGGACGAACACCGGATTGAGACC80.10080645161290322No Hit
ACGATCGATAGGTAAGGTCTTTGGAAAGGACGAAACACCGGATTGAGACC80.10080645161290322No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)