FastQCFastQC Report
Tue 14 Sep 2021
000000000-G67TC_l01_n01_LTBR_TRAF5_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G67TC_l01_n01_LTBR_TRAF5_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21388
Sequences flagged as poor quality0
Sequence length300
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGGGTTGTTTCAGTGT1956091.45315129979427No Hit
CGATCATGATAGTCTTGTGGAAAGGACGAAACACCGGGTTGTTTCAGTGT1890.8836730877127361No Hit
CGATCATGATCGTATTGTGGAAAGGACGAAACACCGGGTTGTTTCAGTGT1680.7854871890779876No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGGGTTGTTCAGTGTT930.43482326538245747No Hit
CGATCATGATCGTCTTGTGAAAGGACGAAACACCGGGTTGTTTCAGTGTT920.4301477463998503No Hit
CGATCATGATCGTCTGTGGAAAGGACGAAACACCGGGTTGTTTCAGTGTT820.3833925565737797No Hit
CGATCATGATCGTCTTGTGGAAGGACGAAACACCGGGTTGTTTCAGTGTT760.3553394426781373No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACGGGTTGTTTCAGTGTT680.3179352908172807No Hit
CGATCATGATCGTCTTTGGAAAGGACGAAACACCGGGTTGTTTCAGTGTT560.2618290630259959No Hit
CGATCATGATCGTCTTGGGAAAGGACGAAACACCGGGTTGTTTCAGTGTT390.1823452403216757No Hit
CGATCATGATCGTTTGTGGAAAGGACGAAACACCGGGTTGTTTCAGTGTT360.1683186833738545No Hit
CGATCATGATCGTCTTGTGGAAAGACGAAACACCGGGTTGTTTCAGTGTT310.14494108846081916No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGGTTGTTTCAGTGTT290.13559005049560502No Hit
CGATCATGATGTCTTGTGGAAAGGACGAAACACCGGGTTGTTTCAGTGTT270.12623901253039088No Hit
CGATCATGAGCGTCTTGTGGAAAGGACGAAACACCGGGTTGTTTCAGTGT220.10286141761735552No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)