FastQCFastQC Report
Tue 14 Sep 2021
000000000-G67TC_l01_n01_LTBR_JUN_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G67TC_l01_n01_LTBR_JUN_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14253
Sequences flagged as poor quality0
Sequence length300
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGCACAGCCAGAACAC1317192.40861573002175No Hit
CGATCATGATAGTCTTGTGGAAAGGACGAAACACCGCACAGCCAGAACAC1090.7647512804321897No Hit
CGATCATGATCGTATTGTGGAAAGGACGAAACACCGCACAGCCAGAACAC940.6595102785378517No Hit
CGATCATGATCGTCTGTGGAAAGGACGAAACACCGCACAGCCAGAACACG510.3578194064407493No Hit
CGATCATGATCGTCTTGTGAAAGGACGAAACACCGCACAGCCAGAACACG400.28064267171823476No Hit
CGATCATGATCGTCTTGTGGAAGGACGAAACACCGCACAGCCAGAACACG370.25959447133936714No Hit
CGATCATGATCGTCTTTGGAAAGGACGAAACACCGCACAGCCAGAACACG310.21749807058163195No Hit
CGATCATGATGTCTTGTGGAAAGGACGAAACACCGCACAGCCAGAACACG270.18943380340980845No Hit
CGATCATGATCGTCTTGTGGAAAGACGAAACACCGCACAGCCAGAACACG270.18943380340980845No Hit
CGATCATGATCGTCTTGGGAAAGGACGAAACACCGCACAGCCAGAACACG210.14733740265207323No Hit
CGATCATGAGCGTCTTGTGGAAAGGACGAAACACCGCACAGCCAGAACAC210.14733740265207323No Hit
CGATCATGATCGTTTGTGGAAAGGACGAAACACCGCACAGCCAGAACACG200.14032133585911738No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAAACACCGCACAGCCAGACACG190.1333052690661615No Hit
CGATCATGATCGTCTTGTGGAAAGGACGAACACCGCACAGCCAGAACACG150.10524100189433805No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)