Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 000000000-G64RH_l01_n01_WGS19-1 000000000-G64RH_l01_n01_WGS19-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 626863.0 0.0 28.0 43.0 5.984561219915675 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G64RH_l01_n01_WGS19-2 000000000-G64RH_l01_n01_WGS19-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 456220.0 0.0 28.0 43.0 10.277936083468502 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G64RH_l01_n01_WGS19-3 000000000-G64RH_l01_n01_WGS19-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 579005.0 0.0 28.0 43.0 5.977323166466611 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G64RH_l01_n01_WGS19-4 000000000-G64RH_l01_n01_WGS19-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 399912.0 0.0 28.0 43.0 4.723289123607194 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G64RH_l01_n01_WGS19-5 000000000-G64RH_l01_n01_WGS19-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 511015.0 0.0 28.0 43.0 10.31809242390145 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G64RH_l01_n01_WGS19-6 000000000-G64RH_l01_n01_WGS19-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 521598.0 0.0 28.0 42.0 5.037596003052159 28.0 pass pass pass pass fail pass pass pass fail pass pass 000000000-G64RH_l01_n01_WGS19-7 000000000-G64RH_l01_n01_WGS19-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 77715.0 0.0 28.0 42.0 5.630830598983465 28.0 pass pass pass pass fail pass pass pass fail warn pass 000000000-G64RH_l01_n01_WGS19-8 000000000-G64RH_l01_n01_WGS19-8.fastq.gz Conventional base calls Sanger / Illumina 1.9 210675.0 0.0 28.0 43.0 4.67877061825086 28.0 pass pass pass pass fail pass pass pass fail warn pass 000000000-G64RH_l01_n01_undetermined 000000000-G64RH_l01_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 748487.0 0.0 28.0 44.0 8.406558831349107 28.0 pass pass pass pass pass pass pass pass fail pass pass 000000000-G64RH_l01_n02_WGS19-1 000000000-G64RH_l01_n02_WGS19-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 626863.0 0.0 287.0 49.0 9.298363438263225 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_WGS19-2 000000000-G64RH_l01_n02_WGS19-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 456220.0 0.0 287.0 51.0 3.4724475033974835 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_WGS19-3 000000000-G64RH_l01_n02_WGS19-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 579005.0 0.0 287.0 51.0 1.7994663258521084 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_WGS19-4 000000000-G64RH_l01_n02_WGS19-4.fastq.gz Conventional base calls Sanger / Illumina 1.9 399912.0 0.0 287.0 50.0 2.5823181099841963 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_WGS19-5 000000000-G64RH_l01_n02_WGS19-5.fastq.gz Conventional base calls Sanger / Illumina 1.9 511015.0 0.0 287.0 51.0 2.9582301889377027 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_WGS19-6 000000000-G64RH_l01_n02_WGS19-6.fastq.gz Conventional base calls Sanger / Illumina 1.9 521598.0 0.0 287.0 51.0 2.615615857422766 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_WGS19-7 000000000-G64RH_l01_n02_WGS19-7.fastq.gz Conventional base calls Sanger / Illumina 1.9 77715.0 0.0 287.0 50.0 9.209290355787171 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_WGS19-8 000000000-G64RH_l01_n02_WGS19-8.fastq.gz Conventional base calls Sanger / Illumina 1.9 210675.0 0.0 287.0 51.0 3.3819864720541117 287.0 pass pass pass pass fail fail pass pass fail fail fail 000000000-G64RH_l01_n02_undetermined 000000000-G64RH_l01_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 748487.0 0.0 287.0 45.0 8.589327536750806 287.0 pass pass pass pass pass fail pass pass fail fail warn