FastQCFastQC Report
Fri 10 Sep 2021
000000000-G64RH_l01_n02_WGS19-4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G64RH_l01_n02_WGS19-4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences399912
Sequences flagged as poor quality0
Sequence length287
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT32154080.40268859149012No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT152653.8170897597471445No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTCTATGGGCGAGCGCT17880.4470983616395607No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGCTATGG16310.4078397247394427No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCCTATGGGCGAGCG15040.3760827382024045No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGCTA12860.3215707455640241No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCTATGGGCGAGCGC12790.31982036047930545No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACACTATGGG11890.2973154093900658No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCTATG9740.24355358178799336No Hit
TGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT8330.20829582508151792No Hit
CCAGAGCGTCGCTGTCCGTGTGCTCCCGCAGGATTCGCAGGTGCGTGGCG7450.1862909840164836No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAAC7100.17753905859289043No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCCTAT6810.17028746324191324No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGCTATGGGCGA6770.16928724319350258No Hit
GGCGATACGACAGCAGTATCTGCTGTCACTATGGGCGAGCGCTATGAGCG6760.16903718818139993No Hit
GGCGATACGACAGCAGTATCTGCTGTCATCTATGGGCGAGCGCTATGAGC6660.16653663806037328No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACC6650.16628658304827063No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACCTATGGGCGAG6410.16028526275780672No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGAG5880.1470323471163656No Hit
GGCGATACGACAGCAGTATCTGCTGTCCTATGGGCGAGCGCTATGAGCGA5680.14203124687431234No Hit
GTCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT5660.14153113685010701No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGAGC5070.12677789113604992No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACTATGGGAGAGC5010.12527756106343396No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGCTATGGGCGAGCGCTATGAG4570.1142751405309168No Hit
GGCGATACGACAGCAGATACTGCTGTCATGGGACTGCACGACAGTCGACT4420.11052431534937686No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACTATGGGCG4420.11052431534937686No Hit
GGCGATACGACAGCAGTATCTATGGGCGAGCGCTATGAGCGACTATGGGA4320.10802376522835024No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACCTATGGGCGAGCGCTA4290.10727360019204225No Hit
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTACTATGGGCGAGCGC4200.10502310508311828No Hit
GGCGATACGACAGCAGTATCTGCTGTCTATGGGCGAGCGCTATGAGCGAC4190.10477305007101563No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)