FastQCFastQC Report
Fri 10 Sep 2021
000000000-G64RH_l01_n02_WGS19-3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G64RH_l01_n02_WGS19-3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences579005
Sequences flagged as poor quality0
Sequence length287
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT29438450.843084256612634No Hit
CCGCTATCGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT24939043.07216690702153No Hit
TGCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT11170.19291715961002065No Hit
GTCGATACGACAGCAGTATCTGCTGTCATGGGACTGCACGACAGTCGACT8140.14058600530219947No Hit
CCAGAGCGTCGCTGTCCGTGTGCTCCCGCAGGATTCGCAGGTGCGTGGCG6360.10984361102235733No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)