FastQCFastQC Report
Fri 10 Sep 2021
000000000-G64RH_l01_n01_WGS19-8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G64RH_l01_n01_WGS19-8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences210675
Sequences flagged as poor quality0
Sequence length28
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTCTGTGGATGAATACTGCCA3780.17942328230687077No Hit
ATTTAAGTACTGTGGATGAATACTGCCA3410.16186068589058977No Hit
TTTATCAATCTGTGGATGAATACTGCCA3200.15189272576243026No Hit
AGTTTTACATTGTGGATGAATACTGCCA3050.14477275424231636No Hit
TTCCTTTAAGTGTGGATGAATACTGCCA3050.14477275424231636No Hit
ATGTAAATAATGTGGATGAATACTGCCA3020.14334875993829357No Hit
ATCATTGCGTTGTGGATGAATACTGCCA3020.14334875993829357No Hit
GGTTTGTTTTTGTGGATGAATACTGCCA2970.1409754360982556No Hit
TCCCTGTTTCTGTGGATGAATACTGCCA2970.1409754360982556No Hit
TATGTTCAGGTGTGGATGAATACTGCCA2950.1400261065622404No Hit
GCACAACATTTGTGGATGAATACTGCCA2940.13955144179423282No Hit
GCAAAAATTCTGTGGATGAATACTGCCA2940.13955144179423282No Hit
TGTCTTTTTTTGTGGATGAATACTGCCA2920.1386021122582176No Hit
ACGTGTTAACTGTGGATGAATACTGCCA2910.13812744749021003No Hit
TTACTTAGTTTGTGGATGAATACTGCCA2890.13717811795419485No Hit
CTTGTGTCTTTGTGGATGAATACTGCCA2880.13670345318618726No Hit
GATAACTGCATGTGGATGAATACTGCCA2840.13480479411415688No Hit
GAGTTTTTGCTGTGGATGAATACTGCCA2840.13480479411415688No Hit
GTTAAAATGTTGTGGATGAATACTGCCA2830.1343301293461493No Hit
ATACATATGGTGTGGATGAATACTGCCA2830.1343301293461493No Hit
TCATTCCAGCTGTGGATGAATACTGCCA2820.13385546457814168No Hit
TAGTTGGTTATGTGGATGAATACTGCCA2820.13385546457814168No Hit
GATGTTCATATGTGGATGAATACTGCCA2800.1329061350421265No Hit
ATATTTCTTGTGTGGATGAATACTGCCA2780.1319568055061113No Hit
AATTGTGTCCTGTGGATGAATACTGCCA2770.13148214073810371No Hit
TAGAATTGATTGTGGATGAATACTGCCA2750.13053281120208854No Hit
TTGATGTAGGTGTGGATGAATACTGCCA2750.13053281120208854No Hit
CATTGTTGTTTGTGGATGAATACTGCCA2740.13005814643408095No Hit
TTTTGTGTTATGTGGATGAATACTGCCA2740.13005814643408095No Hit
TCAATACTTTTGTGGATGAATACTGCCA2720.12910881689806575No Hit
GCTTTTACCTTGTGGATGAATACTGCCA2710.12863415213005816No Hit
TTGCTGTGTCTGTGGATGAATACTGCCA2710.12863415213005816No Hit
TACCTCAAATTGTGGATGAATACTGCCA2700.12815948736205054No Hit
TTACGTGATTTGTGGATGAATACTGCCA2690.12768482259404296No Hit
AACTCAAAGCTGTGGATGAATACTGCCA2680.12721015782603534No Hit
AGGGATCTCATGTGGATGAATACTGCCA2680.12721015782603534No Hit
CAGATAAGTATGTGGATGAATACTGCCA2670.12673549305802775No Hit
TAGCTCAACTTGTGGATGAATACTGCCA2660.12626082829002017No Hit
TAATGTTTGGTGTGGATGAATACTGCCA2650.12578616352201258No Hit
ATTGTGTATTTGTGGATGAATACTGCCA2650.12578616352201258No Hit
GGAAGTCAACTGTGGATGAATACTGCCA2650.12578616352201258No Hit
CGTATTAGAATGTGGATGAATACTGCCA2640.125311498754005No Hit
TGGTCTTGTGTGTGGATGAATACTGCCA2630.12483683398599739No Hit
TACTTCGCTTTGTGGATGAATACTGCCA2620.12436216921798979No Hit
CCTATTTGTGTGTGGATGAATACTGCCA2610.1238875044499822No Hit
ATCCGGTCTCTGTGGATGAATACTGCCA2610.1238875044499822No Hit
GACTCGATGGTGTGGATGAATACTGCCA2600.1234128396819746No Hit
GTAATTATGTTGTGGATGAATACTGTCA2600.1234128396819746No Hit
GTAACCTGTCTGTGGATGAATACTGCCA2600.1234128396819746No Hit
AGCTTGTTCGTGTGGATGAATACTGCCA2590.12293817491396701No Hit
AACTTAAAATTGTGGATGAATACTGCCA2550.12103951584193663No Hit
ATATGAACACTGTGGATGAATACTGCCA2540.12056485107392904No Hit
TATTCATTTGTGTGGATGAATACTGCCA2540.12056485107392904No Hit
GCACTGGATATGTGGATGAATACTGCCA2530.12009018630592144No Hit
GCGTAAGGGCTGTGGATGAATACTGCCA2530.12009018630592144No Hit
CGAAGTGTGGTGTGGATGAATACTGCCA2510.11914085676990625No Hit
GGGCATGCTCTGTGGATGAATACTGCCA2510.11914085676990625No Hit
AATTGTCACCTGTGGATGAATACTGCCA2500.11866619200189867No Hit
ATTTGTATCTTGTGGATGAATACTGCCA2500.11866619200189867No Hit
TGCCTGTGGATGTGGATGAATACTGCCA2490.11819152723389108No Hit
CTTTCAACACTGTGGATGAATACTGCCA2490.11819152723389108No Hit
TTTGTCTGAGTGTGGATGAATACTGCCA2490.11819152723389108No Hit
TTTTTGCGAATGTGGATGAATACTGCCA2490.11819152723389108No Hit
CAGAGGCGTCTGTGGATGAATACTGCCA2480.11771686246588348No Hit
GCAAGCTAATTGTGGATGAATACTGCCA2480.11771686246588348No Hit
CAGTCCCATATGTGGATGAATACTGCCA2460.11676753292986829No Hit
TGAATATTGATGTGGATGAATACTGCCA2450.1162928681618607No Hit
GCGAAGGAGATGTGGATGAATACTGCCA2450.1162928681618607No Hit
AAATTGATATTGTGGATGAATACTGCCA2440.11581820339385308No Hit
CCGGGGCCACTGTGGATGAATACTGCCA2440.11581820339385308No Hit
GTATTATCGTTGTGGATGAATACTGCCA2440.11581820339385308No Hit
TCTTCTAAAGTGTGGATGAATACTGCCA2440.11581820339385308No Hit
ATGGCTCGGATGTGGATGAATACTGCCA2440.11581820339385308No Hit
GCTGCTGCAATGTGGATGAATACTGCCA2430.11534353862584548No Hit
TTTCGCTTTTTGTGGATGAATACTGCCA2420.1148688738578379No Hit
TGATTTGCGGTGTGGATGAATACTGCCA2420.1148688738578379No Hit
GCCGTCACTATGTGGATGAATACTGCCA2420.1148688738578379No Hit
GGGGGGGTACTGTGGATGAATACTGCCA2420.1148688738578379No Hit
CTTATGTTGTTGTGGATGAATACTGCCA2400.1139195443218227No Hit
TCAGTGGGTATGTGGATGAATACTGCCA2380.11297021478580752No Hit
AGGGTTCTGTTGTGGATGAATACTGCCA2380.11297021478580752No Hit
TGTTTGTAGTTGTGGATGAATACTGCCA2380.11297021478580752No Hit
CTCGTCTTTTTGTGGATGAATACTGCCA2370.11249555001779993No Hit
CTTTTGACTCTGTGGATGAATACTGCCA2340.11107155571377714No Hit
ATTGTTTAACTGTGGATGAATACTGCCA2340.11107155571377714No Hit
CTCAACTAGGTGTGGATGAATACTGCCA2340.11107155571377714No Hit
TCGTAGAATCTGTGGATGAATACTGCCA2330.11059689094576955No Hit
GATGAGTAGCTGTGGATGAATACTGCCA2310.10964756140975436No Hit
TTGATTGTGTTGTGGATGAATACTGCCA2290.10869823187373917No Hit
CTCTAGAATTTGTGGATGAATACTGCCA2290.10869823187373917No Hit
ATGGTTGGTGTGTGGATGAATACTGCCA2270.10774890233772398No Hit
GGTGTTCGGGTGTGGATGAATACTGCCA2270.10774890233772398No Hit
TTCGATGTAGTGTGGATGAATACTGCCA2260.1072742375697164No Hit
CGGCGACTTTTGTGGATGAATACTGCCA2250.10679957280170879No Hit
TCCTTTCGCATGTGGATGAATACTGCCA2240.1063249080337012No Hit
GGTGTAGAGGTGTGGATGAATACTGCCA2230.10585024326569362No Hit
AAACACGGAATGTGGATGAATACTGCCA2220.10537557849768601No Hit
AGCTCTCCATTGTGGATGAATACTGCCA2210.10490091372967843No Hit
GTTTATATTTTGTGGATGAATACTGCCA2210.10490091372967843No Hit
CTTACTGTTCTGTGGATGAATACTGCCA2200.10442624896167083No Hit
TTTTTAATTTTGTGGATGAATACTGCCA2200.10442624896167083No Hit
AATTCCGTTGTGTGGATGAATACTGCCA2190.10395158419366324No Hit
GTTTGATAGGTGTGGATGAATACTGCCA2190.10395158419366324No Hit
CTAACGATGATGTGGATGAATACTGCCA2180.10347691942565562No Hit
TCGATTATTCTGTGGATGAATACTGCCA2170.10300225465764802No Hit
TTCATAGCTTTGTGGATGAATACTGCCA2130.10110359558561766No Hit
ATCGAGGCTGTGTGGATGAATACTGCCA2120.10062893081761005No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)