FastQCFastQC Report
Wed 12 Aug 2020
000000000-G59KY_l01_n01_WTA002-Lib1-C9A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G59KY_l01_n01_WTA002-Lib1-C9A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109163
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGGATT302.849661E-422.0000027
GGATGAC302.849661E-422.00000210
GCACGTG302.849661E-422.0000021
TGGCCGA302.849661E-422.00000210
ACAGGCG302.849661E-422.0000022
TGCCTGG302.849661E-422.0000022
GAAGTAC302.849661E-422.0000025
GTCCGAT302.849661E-422.0000027
CGTGTTA302.849661E-422.00000210
CTCTGGC302.849661E-422.0000027
GGTTGGT302.849661E-422.0000023
AGCTACT302.849661E-422.0000028
TTCGCGA302.849661E-422.0000027
GGTTAAC302.849661E-422.0000021
GTAACTC302.849661E-422.0000022
CTGGCCG302.849661E-422.0000029
GCATCCA302.849661E-422.0000022
TAATCGG302.849661E-422.0000022
GTGCATG403.565914E-622.05
AAGTATA454.0119266E-722.06
Produced by FastQC (version 0.11.5)