FastQCFastQC Report
Fri 5 Apr 2019
000000000-G3JC4_l01_n01_GDO2_A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-G3JC4_l01_n01_GDO2_A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences813300
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAAGAAC356.6975226E-520.06
ATGCTTG1050.020.010
CTAACGG408.246381E-620.09
GGCCCTA1800.019.44444510
CGGACGT3250.019.0769231
CTGAGGC950.018.9473695
CGATTGA1800.018.888891
TGCGAGG2450.018.775514
AGACCAA1600.018.752
GTCGACT1550.018.7096778
AAATGCC2150.018.604651
CGAAGAA1400.018.5714285
AGCTTGA5500.018.5454541
CGGAAAT2050.018.5365859
AAACGTT3250.018.4615384
ACTGATG1900.018.4210531
TTAGTTC3600.018.3333341
GTCTGAG2350.018.2978733
CGAGGGA1700.018.2352946
CTTACCG3350.018.2089561
Produced by FastQC (version 0.11.5)