FastQCFastQC Report
Mon 24 Mar 2025
000000000-DRK9T_l01_n02_LL76.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DRK9T_l01_n02_LL76.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4133
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGAGGAGCGAGAGGCAGTTATTTTTGGGTGGGATTCACCACTTTTCCC390994.58020808129687No Hit
TTTGAGGAGCGAGAGGCAGTTATTTTTGGGTGGGATTAACCACTTTTCCC120.29034599564481006No Hit
TTTGAGGAGCGAGAGGCAGTTATTTTTGGGGGGGATTCACCACTTTTCCC100.24195499637067508No Hit
TTTGAGGAGCGAGAGGCAGTTATTTTTGGGTGGGATTCACCACTTTTACC100.24195499637067508No Hit
TTTGAGGAGCGAGAGGCAGTTATTTTTGGGTGGTATTCACCACTTTTCCC90.21775949673360756No Hit
TTTGAGGAGCGAGAGGCAGTTATTTTTGGGTGGGATTCACAACTTTTCCC80.19356399709654004No Hit
TTTGAGGAGCGAGAAGCAGAGACACGATCAGATCGGAAGAGCGTCGTGTA70.16936849745947255Illumina Single End PCR Primer 1 (100% over 21bp)
TTTGAGGAGCGAGAGGCAGTTATTTTTGGGTGGGATTCACCACTTTTCCA70.16936849745947255No Hit
TTTTAGGAGCGAGAGGCAGTTATTTTTGGGTGGGATTCACCACTTTTCCC60.14517299782240503No Hit
TTTGAGGAGCGAGAGGCAGTTATTTTTTGGTGGGATTCACCACTTTTCCC50.12097749818533754No Hit
TTTGAGTAGCGAGAGGCAGTTATTTTTGGGTGGGATTCACCACTTTTCCC50.12097749818533754No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)