FastQCFastQC Report
Fri 24 May 2024
000000000-DP893_l01_n01_Miseq_Ge-0_rep3_flg22.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DP893_l01_n01_Miseq_Ge-0_rep3_flg22.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11383
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTACTTACCGAAACCTCTTCGATATTGGATGTATCATATGATATACC360.31626109110076434No Hit
CTCCCGTTGCTTATTGTTGTAACAAGCATCAGCTCTTTTGATATCTTGTC190.1669155758587367No Hit
CCCCGACGTTTTTCTTCGATGTGGTGAACTCTCCAACCGGAATATCGAGC180.15813054555038217No Hit
CCCGCAACGAACTTCAACACCTCCTTTGGTTCTTATACTACAACGTATAT170.1493455152420276No Hit
CCCCTTACTTACCGAAACCTCTTCGATATTGGATGTATCATATGATATAC170.1493455152420276No Hit
GCCCCCTTACTTACCGAAACCTCTTCGATATTGGATGTATCATATGATAT170.1493455152420276No Hit
CCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAA160.140560484933673No Hit
CCGACGTTTTTCTTCGATGTGGTGAACTCTCCAACCGGAATATCGAGCCA160.140560484933673No Hit
CCCGGGCTCGTTAGGCGACTGTTCATGAACTATCCGTCTACCCAATTTTT160.140560484933673No Hit
CTCCCATTCCTCCAATTCCTGGAAACTCCTATAGATTCTTAGGAATCGGA150.13177545462531845No Hit
CCCGGACCAAAACCGTTGAAATCCCCTGCAAGAGCATCTAACTGTTCAAG150.13177545462531845No Hit
CCCACTCGTTCTTGCTCTTCCGACGCAAAGATGCACCCACGACACAAAGG140.12299042431696389No Hit
CTCATTTTCTTGTTCAGAAACTTGGAATCTTCATCTGTTAGTTCATCGGC140.12299042431696389No Hit
CCGGTGTAATACGTATGAGGGACTTCTCAGCCAACATTGTAAGCCCAACA130.11420539400860932No Hit
CCCCTCTCCTCTTGTTCGTCTATAAACACGTTGATCTTTTCTTTTTTCAA120.10542036370025476No Hit
GGCTGAATATGGAAGGACCTGGTGGTTTTTCTGATCCTCTTATTGCTTGA120.10542036370025476No Hit
CCCGGCTATATTTGATATATCTGTGAGAGCTTGCACCCATCTTTGTTTCT120.10542036370025476No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)