FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n02_H09_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n02_H09_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACTTTCTTGTGCTTTAACCTTTGCTCCACCACACCAAAATGATCTATC15.0No Hit
AAGGAGAGGTATCTCAGTTCTAGCATCTCTTTAAAGACATTGGGAATGTC15.0No Hit
CCCCATATCCCAATCATCCTCACGTCATCTAAATCTAGGCGTAACAATGC15.0No Hit
CTCCCAAATTTATGCCCGATCGATAATTCACTACGTTGTTGTTTGCAAAT15.0No Hit
TATATAGAGCGACTACCTCATGGTTTACACGAGTTGAGAAAGCTAGTACA15.0No Hit
CTTTTTAGATTGCGCATTTAGTAACATCTTTCTTTCATCTCATGTTCACG15.0No Hit
GGGATTGAGTACTCCTACAACTTTATTTTCTTTCTCATGCCAATAGCTAT15.0No Hit
ATCAAGAATGATAAGAATCTTCTTGTCGTGTAGCCTTTCTTGTATCACTC15.0No Hit
GATAAGCTCTATGAGCAGACACCGATCGGGGTTGTAATGGGTCTAGCTTG15.0No Hit
TTTGCATATAGTCGAAAACCTCCAATGCTTTCTCTAGCTTCCCGTTATTA15.0No Hit
CCATATGCCAACCATTCTCACTTCCTCGGATTCCAAATTCAACAATACAC15.0No Hit
TTTCTAGACATTGCGTGTTTCTTCAGATCAGAGGAAGAGGATTATGTAAG15.0No Hit
GTTCTTAGTCGCGTTCTTGAGTTCGTTGAAAGTGAAAGCTTTTAGGTTAG15.0No Hit
CTTCTGTATTATCGTCAATTGATCAATAAAATGCATCCTGTATTCTGTTC15.0No Hit
GTCCAGGAATCCATACTATATATCCACTTTTAACAGAGCACCTGTACATA15.0No Hit
GGTTTTGTTTGACTTCTATATGTTGAATAACAAAAAACAAGCCTTACGCC15.0No Hit
TCTTTTAGTAGGAGAAACAGGGACTGGGAAAACGACCCAAGCTCAAAATC15.0No Hit
ATTGGGCACGTTAATCAGCTGACCAGAATTTATACGTAGATTGAGATAGA15.0No Hit
CAAGCTCCACTGTAGTAGTACTCAGCTTCGTATTTTTATTTTATTTAATA15.0No Hit
TGTAGGGGTTGTGATGGGTCTAGCTTGGACATCCATGGGTGGCTCAACGT15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)