FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n02_H04_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n02_H04_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATACTTCTTTCCAATGTTTTTAAAACCGACCCAGACAGTGAACCGGAC15.555555555555555No Hit
GTCAAGCATTCTTCTTACGGCTAGATCCAATCTCCTGGTCCCTGCGGAAA15.555555555555555No Hit
CGTCGAGCTTGTTCCTGCCTAATTGCTGAATCTTCTTGCATTTTCACAAG15.555555555555555No Hit
GAGGACTTTTCCCGAATTCTCAACCAACATCTCCGTTCTCATGCTTTTTG15.555555555555555No Hit
CTTGAATGGAGTGTGTACAAACATCATCCACATGCAGAGCAAACAGCTCA15.555555555555555No Hit
TCCCACTCCTCTTGTTCATCCAAAGCTAGCCTACGCAATTGAGGAAACCC15.555555555555555No Hit
ACGTTATCCTTTGGATCAGAAGAAACAGTTCGTTTCCAAAACCTAGTTGA15.555555555555555No Hit
TTTGAATACAGATCCACAACCTGCAAGTTCAAAAGCTTCCCGAAAGAGAC15.555555555555555No Hit
GTGCATCCTTACCAGCCCATGAGTAGATATATGCACAAGAGACTTAGCGG15.555555555555555No Hit
CATTATATATGTCTGACCTGAACTCCACTCCATAGCTTCTTAAGCTTGCT15.555555555555555No Hit
GCCCTCTGCAGTTTTCCAGATCTAGTGTAACAAGTTCAGTGAGATTCTAG15.555555555555555No Hit
CATAAAAGGTGTGGGTTTGTGAAAATCTTTCAATAAAGCCTCATCTCGAT15.555555555555555No Hit
CTATTACTCCCGTATAACAAGTTGGTGAGTATCTCAGTTGGATTCTTTCT15.555555555555555No Hit
AAATACTACTGTTTCTTGGGTGGATACTCAAGAGAAGATGACATTCACTT15.555555555555555No Hit
TTGATATAGAGTGCAAAGATCTGCTAAGTGTTAGTCTCGTTGAGCTTCAA15.555555555555555No Hit
ATCTAAGACTGCTATGATCTTGGTCTCCAAGAACTACGCTTCTTCAAAGT15.555555555555555No Hit
GCCTAATAGTCGAGTCGATGTCGTTGTGAGGGAAGTACACTTGTTTAAAC15.555555555555555No Hit
ATTCAGATAACTAGAACTACAATAACTATAAAAAAAAATTTCTAAGTCAC15.555555555555555No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)