FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n02_F02_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n02_F02_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1912
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTTAAACTGTTACTTAAATATGTTCCCGCATATATTGTGATCTAGGCT20.10460251046025104No Hit
GTGTAAGCCTTCTCAGGTATGGATATTGTGCATCAAGTTAGAGCCCCACT20.10460251046025104No Hit
ACGTAGAGTTCTTCTGTTTTAGTACAGAAAAAAAAAAGATAGAGACAATG20.10460251046025104No Hit
GGTTAATAAAGGATATGTCCCTCCGAACCCTCGGTCCAACTATCTCAGAC20.10460251046025104No Hit
CAGTTGTTCTGTTTAGGCAGAGCAGTTTTGAGAAGAAGCAGAGTATTAGT20.10460251046025104No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)