FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n02_D04_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n02_D04_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGAGTGTGGCGAGGTTGGTAAACAAGTAGATCGGCTCGCACAAATGCT19.090909090909092No Hit
ATATGAAACAATCATTTATTGAAGACGAATGTAAGCAGAGAATAATGAAT19.090909090909092No Hit
GTTTTCAAATCCTTGCCAATCATGTTTTAGTTTTAGGAAAAAAGTAAAAC19.090909090909092No Hit
GTTTTATTGGGTAACTTCGTCCTCGGGCACGAGGTTTTAATTTTTTCACA19.090909090909092No Hit
TAAATAACCAACAAGTTTTATAAAACTAATCTTTCCAGCAGATTCTAGAT19.090909090909092No Hit
GCTGAATAGTTTGTCACAATTTTTAATTCAAAAGAAAATGAGGGGTATTT19.090909090909092No Hit
AATCACCACCGTGCCAAGGGTAATAATTTGACCATTCTTCCAGATGGTAA19.090909090909092No Hit
CAATAATAATAATTGTTACAACTAATTCTTTGTTTAAAATAGAAATTTAG19.090909090909092No Hit
ACCTTGAGATTTAAGGCTTGTATCATGCTTGTTAAGGTTAATGAAGAAAT19.090909090909092No Hit
CTCTATATCTTTTTGATCAAAAACCGTGTCAAGCCTGCGTATTGTTCCTT19.090909090909092No Hit
GCATTAAACATACAAACCGAAGAATACAAAGTAATGGGGGAGGAAAGGTT19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)