FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n02_C04_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n02_C04_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAGAGGATGCATGGGAGTTGTTCAAAAACAAGGTCGGAGACAACACATT17.142857142857142No Hit
GGCATGTCATGTGCATGTAAATTATAAAATTTGTTAACATGACTTTTGCC17.142857142857142No Hit
CTTGTTAGACCTATAACAGATTTTTCTTATAATAAGATGTTGATTGCATC17.142857142857142No Hit
GTACAATGCGTCAAGATCAACCAATCCCTTTAACATTCATTAAGTTCAAA17.142857142857142No Hit
GTATAGCAGAACTCCAAGTCGCAGCGAGAAACATGTGGTGAACTCCAAGC17.142857142857142No Hit
GTTGCATGTGGATATGAAAAACATGAAGTGTCTTGTTTTCTTGAACCTGA17.142857142857142No Hit
TGGTGCACCTGCGCAAACACCTAAAGAGCAGGTGTATACAGAGCTTGTTG17.142857142857142No Hit
TTGGATTTATCCATACTATCAAAAGATTTCGATGATTTTGTTGGGATGGC17.142857142857142No Hit
ACCACATCGTTTTGCAATCCTGTAGATTTCTATCGTAAACAGAGAAAATC17.142857142857142No Hit
ACTCTGAGGAATTTGGGGCAACTGAAGAGCATATACAGGGATCCTTTGCT17.142857142857142No Hit
CTTAGGACCATAGACGAATTTCTTCTTCTTATTCTTTTTTGTTAGCTGTC17.142857142857142No Hit
GTTCTAGGGTTATATTTGACCCCTCCCAACCTCTATGACAAACAGATGTC17.142857142857142No Hit
ATTTTGTACTGTAAGTATCTATTGATGATCTACCGGGAATGGAAGATAGA17.142857142857142No Hit
TAATTTTAGTTGTCATTTAAATGTATCTAGGATTTATGATTTATGATTTA17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)