FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n02_A09_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n02_A09_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAATTTTTAGTGGATGCTAGGGACATTTGTCAAGTACTCACCGATAA17.6923076923076925No Hit
GGTTTGGGGTTGTGATATGGGTGGTGGTGTCTAAGAGTCCAGATATCCAT17.6923076923076925No Hit
GCCATTAAACTAAGGGCGTTGGATATGGAGCTTTGCACAAAGCTGGAGAG17.6923076923076925No Hit
GTTTCCTCTTAGCTCATCTTGAAAATACTCTTCGATTCGTTTCCATTCAT17.6923076923076925No Hit
GCATAGAGATATGGTTGTAAGATGAGAAGGGAAGTGTTGTCCACCAGGAA17.6923076923076925No Hit
ACCAAAATCAATGTTTCACAAAATGGTTGCGCAAATACTTACATGGTTGG17.6923076923076925No Hit
GAAGTAGGTTGCTCTTATCAGCTGGAAGATCCCAAATCCTGCTGCTTAAG17.6923076923076925No Hit
CGACTGTGGCTGCTCGATTAGCTGACCAATCAGATGACTTCTCTCCTCTT17.6923076923076925No Hit
ACCTATCTCTTCTTGTTCCTAAATGATCTATCCTCATACCCTTTTGGTTC17.6923076923076925No Hit
ATTGAGGTCAATCCGAATACTATTATCGAGTGGCTGAAACATTGAAGAAG17.6923076923076925No Hit
TTTCTCATATTCTGTATGAATGCCCTTGGCCAGATACGACCACCTGAAAT17.6923076923076925No Hit
GTATAGAGATATGGTTGTAAGATGAGAAGGGAAGTGTTGTCCACCAGGAA17.6923076923076925No Hit
ATATTGCAATGGTCAATCTACAAGATAATCTCAAAGATTTCTCTAATCTG17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)