FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n01_D09_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n01_D09_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTAGAGGCTATGAAGCTTCATGTTTCATCGAACAGTTTGACAAGGCTTT12.5No Hit
CCTCTACGTTCTTGACAGCCCATCTTTGTCTCAGTAGAGTCTTTCAGTGG12.5No Hit
ACATAAGAGACTTCTTGACACATCCAAAAGGTTCTAAAGAGAAGAAGATA12.5No Hit
ATATTAAATGATAATGCGAGAAACTTAAAGCATTTCACTTGGTTTTTTGG12.5No Hit
AGCCTCGACAGGTGCATCCTTGTCCCCAGGACCAACTCCACTACCAGGAT12.5No Hit
GTCATGGTGATTATAATCGCAACGTAGTTCGTAGCTACCCAAAAAACCGT12.5No Hit
TTAGAAGCATTGATATCTCTCTAAGATACATCAAAGTTTTGCAACCAAAC12.5No Hit
CTATTTGGTTATTTAGTAATTATCAGTTCAGGATCGGTTTTATAAGATCG12.5No Hit
CCTCATGTCCCTATGATTTTCTGTGTTTTGTGTTCCGTAACGATTTGCTA12.5No Hit
AGACACGGTATTTCCAAGCTCGAGGTGGAGAAGAACAAGAAGAAGAAGCC12.5No Hit
ACTATAGGTTGCCAATGTCTAGGCTTGCTGATTTTGATGGATGTTATGTT12.5No Hit
GAGTAGTATTCTTGAGAAGCTTCGTCGATACAACTTCTCGTTGATCACCG12.5No Hit
GATACTATCTGTGATTTTCATGTTATAAATTTTATTGTTCAAGCTTGCTA12.5No Hit
AGGTGGATCCTTCTGATGTTCGGAAGCAGAAGGGAGATTTTGGAAAGGCG12.5No Hit
ATGTTACATAAAACTTGATTCTGTAAATTGCTTTTTGTTTATGTTTCTCT12.5No Hit
GAGGTTTTCCCTGACTTTGTCCGTGTCAACAAACAATTCGAAATGCCTCG12.5No Hit
CATAGATTTTTATTTATTACAATTGAAAAATGGATTGGTATTGGTAAACA12.5No Hit
ATCTAATACTGCTTTCACCTCTTTTCACCACAAGGTTGAAATCATTCGTA12.5No Hit
TCCCATAACAAGCTATAAGCGCATTTTCAATCGTTGCTTCATCTACAATA12.5No Hit
ATTCTATCTCATCCTTAGAATATAGATCACTACACATATATGGAAAACGT12.5No Hit
CTGCAACCCTAGCAACATGAGGTCCTCCTCCAACTGGTCCCCTCGCCAAC12.5No Hit
GGCATCAACAGAATCAACTACTGCAAGAGCCTCCTGATGCGCACCTATAA12.5No Hit
GTTTCCCGCATCGTTCAAAGCTTTGCTCCATAGATTTTGTATGTTCTCCT12.5No Hit
GAAGTAGTTTGACACATGTTTTAGAAATTGTATGAAACGCACAAACAAAA12.5No Hit
TTTAAGAGCTTGAAGCTCTGATACCATGTTAGTGTTCTTGTAACAAACTC12.5No Hit
CTCAGAACCAAACGACGTAGGAACAATATTCACTCCTGCTGAATCCGCCG12.5No Hit
ACCAATGGTCTTCCCAAGCTGGTTGAAGTTCATTTCTCCAGTTAGTGAAA12.5No Hit
GAGTATTGCAAACAGATGAGATCTAGCCAAGATTATACTAAGTCAAGTGA12.5No Hit
CAGTTGGGTTTGTAAAGACAACTTTGAACCATAGTCATGTATACCATCAC12.5No Hit
GGATATCAGAGACTGCTTAAATCTTTCGGAATTTCTTGTGGATGTTTCTC12.5No Hit
TATCTCTGCAGTAGCTTGGCCTTCGGATCCAGTGAAGCATGAGATGCTTG12.5No Hit
GAACAAGGAGACCAGATTTTTTTTACAATTGAGTGAGAATTTGGGGTTTG12.5No Hit
CTTTTTAGCACGAGATTTTGAGTCTCGCGTGTCTACCATTTCACCACCAA12.5No Hit
AATTCTGGCACATTATAGGACCCCAAGTTGTCGATATGGTGAAGGAATTT12.5No Hit
GAGCAGAGGGTCTTTTGGCTCTTCATCCATGTCAATGATGATGAAGTGAA12.5No Hit
AATGAGGTCCAACACCAACTGGAACAATATCATCCATCGAACATGGAAAC12.5No Hit
TGTCCCTATGAGTTTTCGTGTTTGTGCGTTTCATTCAATTTGCTAAAACA12.5No Hit
GCCCTGCCTTCGGCACCCCCCTCCTTGCGGTTAAGGTAACGACTTCGGGC12.5No Hit
CATCATGACTTTAGCGAATTCATCATAGTTGAGCCGACCATCACCATCCA12.5No Hit
AGATGAATCAGTAAATTCAAATTCACTGAGATTAAATCTTTGTGAGATCG12.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)