FastQCFastQC Report
Sat 25 Mar 2023
000000000-DKV2Y_l01_n01_C04_ATH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-DKV2Y_l01_n01_C04_ATH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAGAGATTTACATACCAAATAAAATAATCACACAGTAGTATTCATATAT17.142857142857142No Hit
AACATACATGCAGCGATGGTCGTCTTACCAATCCCAGGCGGACCCAAAAT17.142857142857142No Hit
GGTCTTCTCCGATGAATCCTTCGCATATCCAGTAGTCTATCAACTGTTCG17.142857142857142No Hit
TGTTAGAGATGGATGAGGAACCTAAGAATCCTCTGATATTGGGAAGGCCA17.142857142857142No Hit
CATCAGGAATGGCGAGTATGATACTGGTTCTTCGATACAGACAGATGTCC17.142857142857142No Hit
TCAAATGACACAACTTGCCTCACGCCTACTAGATAGAAAGCCACATCTTC17.142857142857142No Hit
CGAATACTCTGAAGCTATGGCGTCCAGTTTGGCGATTGCAGTCCTCCAAA17.142857142857142No Hit
GGGCCGATAAATTCTCCTCTCACGATATCATTATCAATGAATAAGTCGAT17.142857142857142No Hit
GGCTTGGGTAGTCTAAATCAACTGCAACATGCCGGTTTGTTAGGAAGCCA17.142857142857142No Hit
GACTTAGGATCATCATTGGGTTTAGAGATAGGACCATCTACTTGTTATTC17.142857142857142No Hit
CTTGTATATCATATGGACACCAGATAGAACCAGTTTTAAAAGAGCATCTA17.142857142857142No Hit
GATAGATAATGATTCTTCTGATTATCCAAACGCACGATTTGTTAAACTCT17.142857142857142No Hit
GCGCTCGAGCGCCTCGAGAAGATGGCTGAGGAACGTCTTGCGAACATCTT17.142857142857142No Hit
CTTCTATGGCTGTCTCATCCAGAAGCAAAATCTCTAAGCGGCTCATGTTT17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)