Basic Statistics
Measure | Value |
---|---|
Filename | 000000000-CPFB7_l01_n01_WGS15-14.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 643168 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGATCGG | 15 | 1.2641762E-4 | 144.00002 | 2 |
AGGTCAC | 15 | 1.2641762E-4 | 144.00002 | 3 |
TCCGGAC | 15 | 1.2641762E-4 | 144.00002 | 3 |
TCACGAT | 30 | 6.82121E-10 | 144.00002 | 5 |
TCGCCTG | 30 | 6.82121E-10 | 144.00002 | 6 |
GCCCCGG | 30 | 6.82121E-10 | 144.00002 | 1 |
ATCCTGG | 15 | 1.2641762E-4 | 144.00002 | 3 |
GTTTGCA | 15 | 1.2641762E-4 | 144.00002 | 2 |
ATCCTAT | 15 | 1.2641762E-4 | 144.00002 | 5 |
AGACTTC | 15 | 1.2641762E-4 | 144.00002 | 3 |
TTCTAGT | 15 | 1.2641762E-4 | 144.00002 | 5 |
CAGGTCC | 15 | 1.2641762E-4 | 144.00002 | 1 |
TAGAGTA | 15 | 1.2641762E-4 | 144.00002 | 4 |
AGCAATT | 30 | 6.82121E-10 | 144.00002 | 2 |
CGGGTCT | 60 | 0.0 | 144.00002 | 5 |
TGTCAAG | 15 | 1.2641762E-4 | 144.00002 | 3 |
CGGGTAT | 15 | 1.2641762E-4 | 144.00002 | 5 |
CGTGGCT | 30 | 6.82121E-10 | 144.00002 | 2 |
GGCAGTT | 30 | 6.82121E-10 | 144.00002 | 4 |
CAGCGGG | 30 | 6.82121E-10 | 144.00002 | 2 |