FastQCFastQC Report
Fri 31 Jan 2020
000000000-CHT9C_l01_n02_NEGATIVE_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-CHT9C_l01_n02_NEGATIVE_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAAATGACCATCGTCAACATCCACAGCACTCTGCTGTTCCTGTTGATAT21.183431952662722No Hit
GTCCCTCATTCAGCAAGGATCTGGCTTACCGCTACTACGACCCGGCAAAG10.591715976331361No Hit
CCTCACTGACATACGGACTCGAGTCGCTGACATCGGTGCGGTCGTCACCG10.591715976331361No Hit
GTTTCAACCTTTCGACCTTTTCGAAATAAGTTTTATATACCTTAGGGTAA10.591715976331361No Hit
CTAAAATACTATTCATTGAGGAGGGGAAAATCGTTCATACTAGCACATTG10.591715976331361No Hit
GTATACATCTGTTCCCAGCATGTTCCTTGAGTCAAAGGCAACACTTCAAT10.591715976331361No Hit
TTTTAGTCCCTATGTGTCTGGATTCGATCCTCTCGTTTGCCTTTCCTCCA10.591715976331361No Hit
CCCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATACTCACTACCACTC10.591715976331361No Hit
ACTATAACAAGGCCACGAAGAGACTCACAGTTCTCGGAAAGGATGCTGGC10.591715976331361No Hit
GTGTTCATGTGTGTGGGCTTTGTGGGTGACCATCAGGACACCAGGAAGCA10.591715976331361No Hit
CAATAGTTCTCATTGCATGTACCATCTGCCTAGTCTGATTAGCAACCTCC10.591715976331361No Hit
CGAGAGGATCACTTGAATCGCTGCATCTGCACTCCCATTCGCTTCTGGTA10.591715976331361No Hit
GACGAGAGGATCACTTGAATCGCTGCATCTGCACTCCCATTCGCTTCTGT10.591715976331361No Hit
CCCTGGAACTGAGAAGCAGATACTGGGCCATAAGGACCAGGAGTGGAGGA10.591715976331361No Hit
GAACAAGAGCGCTTGTTCGCACCGGAATGGATCCCAGAATGTGCTCTCTA10.591715976331361No Hit
CCCTCCTTCTGTCTCCCGTCCTAATTTCACCAATCTGATTTCTGTTTCCC10.591715976331361No Hit
AGTTGAATAGCTTAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCTC10.591715976331361No Hit
ATTATGAGGAGCTAAGAGAGCAATTGAGCTCAGTGTCATCATTTGAAAGG10.591715976331361No Hit
CATGTGGACTTCCCCCCGTGTTACTCCAATTTCAATGAACCGGTTCTCTT10.591715976331361No Hit
GAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAG10.591715976331361No Hit
TAATAAAACTTCTTCCCTTCGCAGCCGCTCCACCAAAGCAAAGTAGAATG10.591715976331361No Hit
TCCACTATCAGGGCAGAGAGAGGAATTGCCCGCTAATTTCGTGGAAACCA10.591715976331361No Hit
CTCATGGAATGGCCAAAGAGAAGATCACTATTGTCACCGCTGCCTAAGGG10.591715976331361No Hit
GTACTTTAACACAGCCACTGCCCCATTGTCTGGGCCAGAAATTCCAATTG10.591715976331361No Hit
CAGGAGCATTCCTCATAGCGTTAATTAGGGGTATTCATTTCCACTGATTT10.591715976331361No Hit
ATCTCTTACAGTCATGTAATGTTCTTCAAAAAGACTTCAAGCTCGATTAA10.591715976331361No Hit
ATCTGCCGATTAATGGGTTATGTGCTTGGGACATTGAATAATTCGCATCG10.591715976331361No Hit
GCAGTAGGTAAAGAGTTCAACCACCTGGAAAAAAGAATAGAGAATTTAAA10.591715976331361No Hit
CCATTTACACATGCACATTCAGACTCTTGTGTTCTCAATATATTGTTTCT10.591715976331361No Hit
GGGTAGCCCCATTGCATTTGGGTAAATGCAACATTGCTGGCTGGATCCCG10.591715976331361No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC10.591715976331361No Hit
GCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGT10.591715976331361No Hit
GTCTGAGCTCTTCAATGGTGGAACAGATCTTCATGATCTCAGCAAACTCC10.591715976331361No Hit
ATACAAATCCGGTAGAAACTTCGGTTTTTCAGCTCCAGCAGTGTTGCAGA10.591715976331361No Hit
TCCTCAATCCTGTGGCCAGCCTCAATTTTGTGCTTTTTACATATTTTGGA10.591715976331361No Hit
TCATTGAAGTACCTCAGGTCAATGCTTGCTAGCATTTCTGCTGGTATTTG10.591715976331361No Hit
ATATGCTTCTTCATGCAAATTGCCATCTTGATAACTACTGTAACATTGCA10.591715976331361No Hit
GGCATGAGCATGAACCAGTCTCGTGACATTTACTCGAGGGTCATGTCAGA10.591715976331361No Hit
ACCCAATGGTTATTATTTTCTGATTTGGATTCATTTTAAACTCCTGCTTT10.591715976331361No Hit
ACCCGAGTGGTTCAGAAACATCCTGAGCATGGCACACATAATGTTCTCAA10.591715976331361No Hit
CAATAGTACGTTCCCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATAC10.591715976331361No Hit
CACCACCCATCTACTAGTGCTGACCAACAAAGTCTCTATCAGAATGCAGA10.591715976331361No Hit
CACACAAGCAGGCAGGCAGGATTTATGTGCAACTGATCCCCTCAGAATGA10.591715976331361No Hit
GAGTAAAGATGAATCCAAATCAAAAGATAATAACGATTGGCTCTGTTTCT10.591715976331361No Hit
GTAAAGTCCCATTGTGCCAAGTCAGTGTCACTAAGATCTTCAACTTACGT10.591715976331361No Hit
CTCCCTATCCAAACACCATTGCCGTATTTGAATGAAAACCCTTTTACTCC10.591715976331361No Hit
ATCTTTGTATCCGGATTTCAGTTCCACACCCTTGATCTGGAATCGATTAT10.591715976331361No Hit
GTTTGTTAGAATTCCGTTCCGCCTACTGAGGGTTGTCCTTTGGCCGTTTT10.591715976331361No Hit
TACAATGGCACAATACCACTGTTATTGAGTATATAGAGAGATCAGAGAGT10.591715976331361No Hit
CCTCGCTCACTGGCACGGTGAGCGTTAACACCAATCCTTAAATTTCCTTA10.591715976331361No Hit
GATAAGTGTTGACTAGCACTGACTCAGGGCCATTGATCTCCCACATCATT10.591715976331361No Hit
CCGATGGACCAAGTAATGGACAGGCCTCATACAAGATCTTCAGAATAGAA10.591715976331361No Hit
CTATGGTGTTGGCCAATGCTGTTGCTGCCGGTTGATTCCTGTTTTATGTC10.591715976331361No Hit
GGCATTACCACAGCATTGTTTACAGAATCAATCTCTTTATGACTGACAAA10.591715976331361No Hit
GCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCAGTGC10.591715976331361No Hit
GATTCAGGCGATTACAAAGCCTTCCCCGATATTGTTTCAAGGCATGAATT10.591715976331361No Hit
GTCCATCATAATCACTGAGTTTGAGTTCAGTGCACATTTGGATGTAGAAT10.591715976331361No Hit
AATTTATAGGGGTTAACCTCTGCATCTCCATCTGTTAAAAGACCAGCAGG10.591715976331361No Hit
GTCCAAAATGCCCTAAATGGGAATGGGGACCCGAACAACATGGATAGAGC10.591715976331361No Hit
GTCATGTCGGGTAGTATTCCGATCATTCTCATCACATTGCCGATGGACTC10.591715976331361No Hit
GCTAATGGGTCTGCTGACACTGCTGCTCTTCTTACTATGTTTCTAGCAGC10.591715976331361No Hit
CCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGTTGTATATGAGGCT10.591715976331361No Hit
ATACAGAAACTGGGGCGCCCCAGCTCAACCCAATTGATGGACCACTACCT10.591715976331361No Hit
AGTATTGATTGCTAATCGCTGCATTGCCACAACTACTTCAGTCCATTTGT10.591715976331361No Hit
CCATTACATCCTTTAAGAAATCTATTAGCCTTCCTGACTCATTAGTTGTT10.591715976331361No Hit
CGATTCAAGTGATCCTCTCGTCATTGCAGCAAATATCATTGGGATCTTGC10.591715976331361No Hit
GTTGTATAGCATTGTGGGATCTTGTGACCATTGAATTTTCACAATTTCCC10.591715976331361No Hit
TAGTGTATCTGACCAACACCACCATAGAGAAGGAAATATGCCCCAAACCA10.591715976331361No Hit
GTGTACATTGAAGTGTTGCATTTGACTCAAGGAACATGCAGGGAACAGAT10.591715976331361No Hit
CCATTCGGGTGCTAACAATCGCTCTCGTTCTCTTTTATCTTCCATCTTTC10.591715976331361No Hit
GCTTTTTTGAGTATGGCTGTTGATCCTCACCCAACCAATGGGACGAGTTC10.591715976331361No Hit
GCGAAAGCAGGGTAGATAATCACTCAATGAGTGACATCGAAGCCATGGCG10.591715976331361No Hit
GCATAACGGGAAACTATGCAAACTAAGAGGGGTAGCCCCATTGCATTTGG10.591715976331361No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC10.591715976331361No Hit
CTCCTTGCCCGATTAGCACATTATCCTTTTCCCCTTTTGCAAGGATACTC10.591715976331361No Hit
CATTAGAGCACATCCAGAAACTGATTGCCCCCAGGGAGACTACCAGTACC10.591715976331361No Hit
CTAATAATAGTTTCTTTAGTAGATTAAATTGGTTGACCCACTTAAACTTC10.591715976331361No Hit
ATGCATATCCCTGTACCACTAGATTTCCAGTTGCTTCGAATGTTATTTTG10.591715976331361No Hit
GTCCTACATTGTGGAAACACCTAGTTAAGACAATGGAACGTGTTACCCAG10.591715976331361No Hit
TCCTTCTTCAGTTCTTTCAGCAGATTGAGAGCATGATTGAGGTCGTGTCT10.591715976331361No Hit
CCAATGAACTGGCGACAGTTGAATAGATCGCCAAAATCTGGTAAATCCTT10.591715976331361No Hit
AGCTAAGGCTATGGAGCAAATGGCTGGATCAAGTGAGCAGGCAGCGGAGG10.591715976331361No Hit
ATCCTGTTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATA10.591715976331361No Hit
GTAATAATAAGATCAATTATACACTCATAATGGCCCACCATTATCATCTT10.591715976331361No Hit
TATTTGGACAGTGTCAAATGTCCCAAGCACATCCCGCATTTGCTGGAACA10.591715976331361No Hit
CACAAATACCAGCAGAAATGCTAGCAAGCATTGACCTGAAGTACTTCAAT10.591715976331361No Hit
ATTCCAAATGTGTGCATATTGCAGCAAACTTGGTAGTTTCGGTTTTCGGA10.591715976331361No Hit
ATGTCACACTCTATGGACATTTAGCAACTTGATCCTTGTGAGAACTGTCT10.591715976331361No Hit
CAAAATGACTGTCGTCAGCATCCACAGCATTCTGCTTTTCCTTTCGATGT10.591715976331361No Hit
GGCCATGGAGGTTGCTAATCAGACTAGGCAGATGGTACATGCAATGAGAA10.591715976331361No Hit
GCCTTGGTGTTGTCTTCAGAAAAGGTTCAATTTGTGCATTCACTTCTTTG10.591715976331361No Hit
CCTTTGCTGCTGCCCCACCAGAACAGAGTAGGATGCAATTTTCCTCATTG10.591715976331361No Hit
AGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCC10.591715976331361No Hit
GATTGGTCTTGTCTTTAGCCATTCCATGAGAGCCTCAAGATCTGTGTTCT10.591715976331361No Hit
GGTCAATGCTCACCACTACCCTCTCCGTGCTGGAGTACTCCTCTACACCC10.591715976331361No Hit
CTCTCAGATCTCTAGTGGCCTCATCAGGAACCCTAGAGATCATCACTGAA10.591715976331361No Hit
CGATTATGAGGAGCTAAGAGAGCAATTGAGCTCAGTGTCATCATTTGAAA10.591715976331361No Hit
GACATATGTTAACATCAGCAACACCAACTTTGCTGCTGGACAGTCAGTGG10.591715976331361No Hit
TCTATGTAAATAGCCGATAACAGGTGTAGCTTCTTTTATGATTTCTCCGT10.591715976331361No Hit
TTAATGAAGGATTTGCTGAGGTTTGGGTATGAATTTCCTTTTTTAACTAG10.591715976331361No Hit
GAAATAAGAACTCAAGTGTTGCAAAATTTCTCCCTTGATGGTTTCCTACA10.591715976331361No Hit
TCTCACTTCTCCTCCTGGAGTGCACATCTGCCCTTAGCACGTCCCTTGGG10.591715976331361No Hit
TGCCACTTGTGATCAGATTGCTGATTCACAGCATCGGTCTCACAGACAGA10.591715976331361No Hit
TCTCGCCACTTTTCATTTCTGCTCTGGAGGTAGTGAAGGTCTCCCATTCT10.591715976331361No Hit
GTCCCATTGCAGCCTTGCATATATCCACGGCGTGCCCTTCTGTTGGGTTC10.591715976331361No Hit
GCAACGCTGTGCCTTGGGCACCATGCAGTACCAAACGGAACGATAGTGAA10.591715976331361No Hit
ACTCGATCTAATCCTAAATAATTCATTTAACTCCATACATATTGTCCTTG10.591715976331361No Hit
ATACTGGGCCATAAGGACCAGGAGTGGAGGAAATACCAATCAACAAAAGG10.591715976331361No Hit
GTCTAAAAAACCGAGCCTTTGGAGCGGTCGATAATAGTCACCGCGGCAAA10.591715976331361No Hit
GCATCCGAGCACACATGGCGTGTTCAGGCTGGTGATCAAGATTGACGGAG10.591715976331361No Hit
GGATTACAGATGTGGGCCCCTGTGCCAGGCCAAATTTACATTCCCACCAA10.591715976331361No Hit
ATCCAGCCATCTGTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATT10.591715976331361No Hit
GACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTATGGATTTGTGG10.591715976331361No Hit
GGTTTAAAGTATGGTAGTGCGTTGCTGAACAAAAAAAAAGCCGCTAACGA10.591715976331361No Hit
ACTTTAACACATCCACTGCCCCATTGTCTGGGCCAGAAATTCCAATTGAT10.591715976331361No Hit
GTGTATCTGTGGATGGGAAGAACAATCAACGAGTCGTCACGCTTAGGGTA10.591715976331361No Hit
ACTTCCTCGTCGTCAATGATGTAAGCGACTCAAGAGACCACATCATTGTC10.591715976331361No Hit
TCCTTGGAAATGTCTTTCTCTTTGACAGAAGACTCGGCCTCAATCATGCA10.591715976331361No Hit
TGTCCATAGAGTGTGACATGAGAACCAGATCTCTTTTTTTTTTTTTTTCT10.591715976331361No Hit
GGGAAAATCGTTCATACTAGCACATCGTCAGGAAGTGCTCAGCATGTCGA10.591715976331361No Hit
GCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCG10.591715976331361No Hit
CCTCTCGTCATTGCAGCAAATATCATTGGGATCTTGCACCTGATATTGTG10.591715976331361No Hit
CTGTTGTCTTTACTGTATATAGCCCATCCACTAACAGGGCAGAGAGAGGA10.591715976331361No Hit
CATGTTGCAGAACTAACTGCGCCGCCAAACGAGATTCCTCCCTTTAACTG10.591715976331361No Hit
CTTGAGTTGTATGGAGAGGGAACTTCACCAATAGGACAGCTCATTAGGGT10.591715976331361No Hit
CCACACCAATTGACTCTTGTGAGCTGGGTTTTCATTTGGTCTCATCAGGC10.591715976331361No Hit
CTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATACTTTA10.591715976331361No Hit
GTTAAAGATTACACTGAAGTTCGCTTTCAGTACTATGTTCTTTTCCATGA10.591715976331361No Hit
ATATCGAAACAGCCACTCTTGTTGGGAAACAAATCGTGGAATGGATCTTG10.591715976331361No Hit
CCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCGTGCCCAG10.591715976331361No Hit
AATGTGTGCAACATGTGAGCATATTGCTGATTCCCATCACAGGTCTCATA10.591715976331361No Hit
CACTATGGCTTACCCCCTCAATTCAGCTTAAGGCTCACAACCCAATTGAC10.591715976331361No Hit
GAGCTTAAACTGCCGAGGGAGCAATGGTCAGCGAAATTTCAACATTGGCT10.591715976331361No Hit
GCCTTCTATCTATCCCCATCTTGTTCTTCCTTACGGTTCTGTCCACCAAT10.591715976331361No Hit
GTTTGTCACTGCCTCTTCTTCAATTTGGAGAAATGCATTTAGACTTGCAT10.591715976331361No Hit
ACAATTTCATCGGTAACTCCTTTTGTCTGTGGTTTAAAGTATGGTAGTGC10.591715976331361No Hit
TGTTTGTTCTGTGATTTGATGAATATTATTTGTAAGCTGGTTTGTTTCTT10.591715976331361No Hit
ATAGAAGAGTAGGCGGAAAGTGGATGAGAGAACTCATCCTTTATGACAAA10.591715976331361No Hit
CCTCAACCCTGATCCTCTCACATTCACAGTCAATGAGGAAAATTGCATCC10.591715976331361No Hit
GATTGGCGCCTTGCCCTACTATCTCGTTACCCTACTCAGCTGTCTTTGCG10.591715976331361No Hit
CTAAGCATCAATGAACTTAGCAACCTTGCTAAAGTAGAGAAGGCTATTTT10.591715976331361No Hit
ATTCAAGAATGTGCAATGGCCTCAGATGAAGATTTCAAACAGCTGCCCAG10.591715976331361No Hit
GTCCTTATAGTCTAGTATCTTCTTCTCAGTTCCTGTGCATTGGAGCCCAC10.591715976331361No Hit
GACCATTATTGGTGCGATCCTCAGTCTGTTTGTGAACCACTCAGGTTGAT10.591715976331361No Hit
ATCTACCTTCATCTATCACTGCCATCTGGGCAGCGGTTTGAAATTTTCCT10.591715976331361No Hit
AAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAAC10.591715976331361No Hit
GCTCAATTGCTCTCTTAGCTCCTCATAATCGATGAAATCTCCTGGGTAAC10.591715976331361No Hit
GGGCTACCCCTCTTAGTTTGCATAGTTTCCCGTTATGCTTGTCTTCTAGA10.591715976331361No Hit
CACTTATTCTACTTCAGGCAGTGGTTGTAAGGCTTGCATCCATATTATTT10.591715976331361No Hit
TCGCTCTCCTGGTGTCAGTTGTGTCTGCAGAGACAACTGGCCAGACTCCA10.591715976331361No Hit
GTACCTAGCAGTGGATCATCCGGAACTGTGTATCTGTTAAAATTCAGTAG10.591715976331361No Hit
CAGCTTGCTAGAGATCTGGGCTCTGGCTCATCACTGTCATACTGTTTAAG10.591715976331361No Hit
GTAATTATTTAAGTATACGTTTAATGATTCCATCCATTTCCCCCGTTATG10.591715976331361No Hit
ACACAGATCTTGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATTCTG10.591715976331361No Hit
CTCTAGCTCTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCT10.591715976331361No Hit
CATTAGCCTTTTCCCCTTTTGCAAGGTTACTCAGTTCACTGATGCTTAAT10.591715976331361No Hit
ACGCTGAATACTGTCGGGCTGCACGTGTATCACCGACAATTCTACTTCTT10.591715976331361No Hit
ACACCACGTCTCCTTGCCCGATTAGCACATTAGCCTTCTCTCCTTTTGCC10.591715976331361No Hit
ACTTTTAAAACATTTTCAAAAGAATGAAACAGCTCTTTTTCCACATTTGT10.591715976331361No Hit
CTCCAACACCATGTCAAGCTTTCAGGCAGTCTGGTTCTTTTGTCATATCC10.591715976331361No Hit
ACTGTACAAGTTCCATTGATACAAACGCATTCTGACTCCTGGGTCCTGAG10.591715976331361No Hit
GAAGATGGCCACGCAAAGAACAATAGGGAAGAAAAAACAAAGACTGAATA10.591715976331361No Hit
AACTTTTCGTTAGCGGCTTTTTTTTTGTTCAGCAACGCACTACCATACTT10.591715976331361No Hit
CAATTAACCACCTTATTTCCTCAAATTTCTGTCCCAATTGCTCTCGCCAC10.591715976331361No Hit
GGCAATAATTGTGGCCATGGTATTCTCACAGGAGGATTGCATGATCAAGG10.591715976331361No Hit
TCCTCGAGTCAAATGCAACACTTCAATGTACACACTGCTTGTTCCACCAG10.591715976331361No Hit
GCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTCATATAGC10.591715976331361No Hit
GAGCAACCTTGCGAAAGGAGAGAAGGCTAATGTGCTAATTGGGCAAGGAG10.591715976331361No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers