FastQCFastQC Report
Fri 31 Jan 2020
000000000-CHT9C_l01_n02_BLANK_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-CHT9C_l01_n02_BLANK_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGAC21.2048192771084338No Hit
GCTTAATGCTGGTCCGTATCTTCTGTCTTCCTTACCTATTTCATTGCCAT10.6024096385542169No Hit
ATTTTATCCTGAGCTGCATCTGTCAATTCAAGCACAAGATCCTGTTCGGC10.6024096385542169No Hit
ATCTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCAC10.6024096385542169No Hit
GCCAATTGATGCCATCATGACAAGCACTTGCTGACCAAGCGACTGACTCA10.6024096385542169No Hit
AACAACTACATTTCATAAGCCAACAGTGTACAACACTTTTGATGAAAGAG10.6024096385542169No Hit
GAACAGTTGATTTCAGGAATACGATTTTAATCATGACATCCAATGTAGGC10.6024096385542169No Hit
CCCAAGGCACAGCGTTGCCGTGCTATTGCCATTTCCAGGAAGTTTTTGAG10.6024096385542169No Hit
TTCCTATACAGTTTAACTGCTTTGTCCATGTTATTTGGGTCTCCCTTCCC10.6024096385542169No Hit
CACAAATCATCTCAAAACCGTTTCTTGAACTAATGCTTTTAGTTCTCCCT10.6024096385542169No Hit
ATGCAGCAGAGTGGCATGCCATCCACACCAATTGACTCTTGTGAGCTGGG10.6024096385542169No Hit
TGTTTGTTTCGTCTCAGATGGTTATTTTATTTTTTCAGCCTCTGCTTCAG10.6024096385542169No Hit
CCTTGTCCTTCGTCCATTTTCACCCCTCCAGAAATTTCGGTCATTGATTC10.6024096385542169No Hit
CCATCTACTAGTGCTGACCAACAAAGTCTCTATCAGAATGCAGATGCATA10.6024096385542169No Hit
CAATTGTTCCTCTCAGCAGCTCTTCGGACAATCTGTCTTCTACATGTTTT10.6024096385542169No Hit
GTTATTATGCCGTTGTACTTTAACACAGCCACTGCCCCATTGTCTGGGCC10.6024096385542169No Hit
ATGGAAAGTGCAAAACCAGAAGATTTGTCCTTCCAGGGGCGGGGGGTGTT10.6024096385542169No Hit
CACTCGAGAAGAAGCATATTAAAGAGATCGTGACGTTAATGGCAGACCAA10.6024096385542169No Hit
CTGTTAACCTTCTAGAAGACAAGCATAACGGGAAACTATGCAAACTAAGA10.6024096385542169No Hit
GGAGTGCAGATGCAGCGATTCAAGTGATCCCTGTCTCTTATACACATCTG10.6024096385542169No Hit
TGATCATTCTGATTAACTCCATTGCTATTGTTCCAACTCCTTTCACCGCA10.6024096385542169No Hit
GATCTTGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATCTTGTCACC10.6024096385542169No Hit
CTCCATACAACTCAAGATTTGAGTCAGTCGCTTGGTCAGCAAGTGCTTGT10.6024096385542169No Hit
AACAGACACTATTAAGAGTTGGAGACACAATATATTGAGAACACAAGAGT10.6024096385542169No Hit
GTAGTATTAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTC10.6024096385542169No Hit
GGCAGCAACTGCATTGGCCAACACCATAGAAGTCTTTAGATCGAATGGCC10.6024096385542169No Hit
GTATTGGCTTCTAATGGCCTTGGGGACTAAAGATTGAAATGGTTCAAATT10.6024096385542169No Hit
GCTCTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGT10.6024096385542169No Hit
AGTTCATTCTCCCTTCTTGACCCCTCACTTTGGGTCTTATTGCTATTTCC10.6024096385542169No Hit
ATTAGAGACCTTGATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAG10.6024096385542169No Hit
ATATACAGTAAAGACAACAGTGTAAGAATCGGTTCCAAGGGGGATGTGTT10.6024096385542169No Hit
CTATGAGGAATGCTCCTGTTATCCCGATTCTTGTGTAATCTCAAGGGTGT10.6024096385542169No Hit
GAATAAGGCTTTCTGCGGACTTTCTCAGTCAGCTGCCCTCCTTCTTCATA10.6024096385542169No Hit
ATTTTCTGTCGCTTTTAATCTGTGCCTCATTTCGTCAATTCACCACCTTA10.6024096385542169No Hit
ATGCAATGATCCGCATCGATATGTCTGAATATATGGAGAAGCATTCGACA10.6024096385542169No Hit
GTGGATTCTTGATCGTCTTTTTTTCAAATGCGTCTATCGACTCTTCAAAC10.6024096385542169No Hit
AATCAGAGGGCGACCCAAAGAGAACACAATCTGTACTAGCGGGAGCAGCA10.6024096385542169No Hit
CTCCCAAGACCGTACTTAGCATGTTGAACATGCCCATCATCATCCCAGGA10.6024096385542169No Hit
CCGCATTTCTTCAATTAACCACCTTATTTCCTCAAATTTCTGTCCCAATT10.6024096385542169No Hit
CGCCTTCGTTACTGAATACTATAATTATTCAAGTGCCATTTCTTTAAATA10.6024096385542169No Hit
CCCTAATGAGCTGTCCTATTGGTGAAGTTCCCTCTCCATACAACTCAAGA10.6024096385542169No Hit
CAATAGGATGGGGGCTGTAACCACTGAAGTGGCATTTGGCCTAGTGTGTG10.6024096385542169No Hit
GTCTTTGCCATTATGTTCGGTCCTTCCTTACTAGATTACCTATTTTAGAT10.6024096385542169No Hit
AGATAGGAGATATGTTACTAAGAAGTGCCATAGGCCAAATTTCAAGGCCG10.6024096385542169No Hit
CAATGGAGTTAATCATAATGATCAAACGTGGAATCAATGACCGAAATTTC10.6024096385542169No Hit
GCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGAAAGGTAG10.6024096385542169No Hit
GTGATAATTAGGGGCATTCATTTCGACTGATTTGACTATCTTTCCCTTTT10.6024096385542169No Hit
TATATTCAGACATATCGATGCGGATCATTGCATCTTCGTCACCGAAAATA10.6024096385542169No Hit
GATATGGGCAATGGTTGTTTCAAAATATACCACAAATGTGACAATGCCTG10.6024096385542169No Hit
AACAAAGGTGTAACGGCAGCATGTCCTCATGCTGGAGCAAAAAGCTTCTA10.6024096385542169No Hit
CAACAGTTCGGCATTGTAAGTCCAAATGTCCAGGAAACCATCATCAACTT10.6024096385542169No Hit
TTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAA10.6024096385542169No Hit
CTGTATATTTTCTGAGACTCGAACCGTGTTACCATTCCATTCAAGTCCTC10.6024096385542169No Hit
GCTCCAGTCTTTCGCCTGTGGAGTTTTTTAAACGAAAGGCTGAGGCCATA10.6024096385542169No Hit
ATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGCCGCATT10.6024096385542169No Hit
GTTTCCTTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGAT10.6024096385542169No Hit
GATTATCGCTGCTAGAAACATAGTAAGAAGAGCAGCAGTGTCAGCAGACC10.6024096385542169No Hit
CTTCCTTACTAGATTACCTATTTTAGATAAGAGATGGTTATATTTGATGT10.6024096385542169No Hit
GCATATCCTGACCCCTGCTCATTTTGATGGCGATAACCGTACCATCCATC10.6024096385542169No Hit
CAGATACACATATCGGTGCCATAGAGGAGACACACAAATCCAAACGAGAA10.6024096385542169No Hit
TGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTGCCACTTGT10.6024096385542169No Hit
TTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCG10.6024096385542169No Hit
CCAAAGTGGATGGGGAAATGTCCAGGGTGCGGCGCGTGGAATACGATGAC10.6024096385542169No Hit
GTCATTACTACTGTACAAGTTCCATTGATACAAACGCATTCTGACTCCTG10.6024096385542169No Hit
GCAAATAGTAGTACTGCCATAGCTATTTTAACGTATGTGTTAGGAAGGAG10.6024096385542169No Hit
AGTGAAGGTCTCTCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTAT10.6024096385542169No Hit
AACTTAAACGCAATAAATACGTTGGCTTCAATGTACAGGATGAAGCTCAG10.6024096385542169No Hit
ACCCAAGGGTGATATCAAGGCCATCTTGCAATTAGAGAAGAATCATTCGA10.6024096385542169No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC10.6024096385542169No Hit
GTGTATGCCTCATGTTTGTTTCGTCTCAGATGGTTATTTTATTTTTTCAG10.6024096385542169No Hit
AGATATATGTTTCTTGCTCTATACTTCTCACTTTCTCTTTCCCTCTTTGG10.6024096385542169No Hit
GTTCTCATAGGCATATGTTTTCAACGATTACTCCATTAATAAGACATGTT10.6024096385542169No Hit
GTGCGAAACAATAATGAAGCCAGAAGATTGATTAACGATGAAAAACACAT10.6024096385542169No Hit
ATTTTGTTGTATAGCATTGTGGGATCTTGTGACCATTGAATTTTCACAAT10.6024096385542169No Hit
ATCTGTCTGTGAGACCGATGCTGTGAATCAGCAATCTGTTCACAAGTGGC10.6024096385542169No Hit
ATGTTTGTTTCGTCTCAGATGGTTATTTTATTTTTTCAGCCTCTGCTTCA10.6024096385542169No Hit
GTATAAGGATGTCCACCATCCTTACTCCTCCAATCTGTGTGCTGTGGCAC10.6024096385542169No Hit
CCATTAGACGATACTGGACCACAACTGCCTGTCTTATCATTAGGGCGTGG10.6024096385542169No Hit
GAGTAGGATGCACTTTTCCTCATTGCCTGTGAATGTGAGAGGATCAGGGT10.6024096385542169No Hit
GTCTGATCCAGCATCGTTTGTTTTGCTTCAGAGGGTCTGTCCTTGTTCAT10.6024096385542169No Hit
ACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTT10.6024096385542169No Hit
CTGCATCTGCACTCCCATTCGCTTCTGGTAGGCCTGCAAATTTTCAAGAA10.6024096385542169No Hit
CAGCAGAAGTGTCCCACTGCAGGGCTACTGAATACATAATGAAGCTGTCT10.6024096385542169No Hit
AAAGAACACAGATCTTGAGGCTCTCATGGAATGGCTAAAGACAAGACCAA10.6024096385542169No Hit
CAACGTGCATTCAAATAACACAGTACATGATAGGACCCCTTATCGGACTC10.6024096385542169No Hit
GTATAACATTGTGGGATCTTGTGACCATTGAATTTTCACAATTTCCCAGT10.6024096385542169No Hit
CTGTTGGTTCTATTGGAAAATGAAAGAACTTTGGACTACCACGATTCAAA10.6024096385542169No Hit
GGTACTGGTAGTCTCCCTGGGGGCAATCAGTTTCTGGATGTGCTCTAATG10.6024096385542169No Hit
CTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACC10.6024096385542169No Hit
TCTCTCCTTGTCACTCCAATTTCGATGAATCTGTTCTCTTTGTAATCATA10.6024096385542169No Hit
ACTTTTTTATTTAAATTCTCTATTCTTTTTTCCAGGTGGTTGAACTCTTT10.6024096385542169No Hit
ATGTAGGACCATGAGCTTGCTGTGGAGAGTGATTCACACTCTGGATTTCC10.6024096385542169No Hit
CCGTTGGGGCCCTCATCGGAGGACTTGAATGGAATGGTAACACGGTTCGC10.6024096385542169No Hit
TCCCCACCTTCTTATCTCCAACAACTCGTCTATCAGCTCCCTGACTCCCT10.6024096385542169No Hit
CCATTGCCCATATCCTCAGCATTTTCCCTCAGTTGCTTCTTTGTTTTTTC10.6024096385542169No Hit
CTATTCACTTGCCTTTATGGATCACCATAATTGGAAGTCTTTTCAGCGGT10.6024096385542169No Hit
AAACAAGGGTGTCTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA10.6024096385542169No Hit
CGATCAAGGAATGGGGCATCACCCAATCCATTGTCTGCAAATCGCTTGCG10.6024096385542169No Hit
CGTCAACATCCACAGCACTCTGCTGTTCCTGTTGATATTCTTCCCTCATG10.6024096385542169No Hit
GTTGAGGCGGAAATCGAGCCACCCCAACAGGCCCAACGACCACAGGATGG10.6024096385542169No Hit
TCTCCATATATTCAGACATATCGATGCGGATCATTGCATCTTCGTCACCG10.6024096385542169No Hit
GCCTTTAGAATCCGTTAAACGGCCATCTTCTAAAACTTGAAGCAGAATGT10.6024096385542169No Hit
TCACAGTCTGGGGAATTCTGGTCAGATCCTTTTGGTTACAAAGAAAAGAG10.6024096385542169No Hit
CAACATGACCAAGAAGATGGTCACGCAAAGAACAATAGGGAAGAAAAAAC10.6024096385542169No Hit
GAATAGGAGTAGTTGCTGGAGTAAACAGACATCTGTTAAATACTTTTCAA10.6024096385542169No Hit
CCTTTCGTCAGTCCGAAAGAGGCGAAGAAACAATTGAAGAAAAATTTGAG10.6024096385542169No Hit
CCTGACTAGCAATCTCCATGGCATCCGCTGCCTGCTCACTTGATCCAGCC10.6024096385542169No Hit
GCTCGGGAGAATTGCTGTCGATATGCATAATAGACAGGCCCGATTTTGTT10.6024096385542169No Hit
TTCCCATTTAGGGCATTTTGGACAAAGCGTCTACGCTGCAGTCCTCGCTC10.6024096385542169No Hit
GTCTTTAACATTCTGCTTCAAGTTTTAGAAGATGGCCGTTTAACGGATTC10.6024096385542169No Hit
CTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCTCACCG10.6024096385542169No Hit
AGGCTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATG10.6024096385542169No Hit
GAGAGGGCAAGTTGAACAGATGATTGCCGAAGCCATGACTGCGACTATGT10.6024096385542169No Hit
GTATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGTGT10.6024096385542169No Hit
CAGTTTTTGATTGCCTCGTCGGATTCTTCCTCCCAAATCCGCTCCACTAT10.6024096385542169No Hit
CTGGTAGGCCTGCAAATTTTCAAGATGGTCATCTTTCAGACCAGCACTGG10.6024096385542169No Hit
TCACATGTTTGTGCAGGGATAACTGGCGTGGCTCGAACCGTCCGCTGTGG10.6024096385542169No Hit
GCTTCAGAGTTTTTCACTACGAATTCACCGTCTGTAACATCAAGAACAAC10.6024096385542169No Hit
CTCCGCATCCAATTTTACTTTTCGCTTCCTATGTTTTTCCCCCTTGCCTT10.6024096385542169No Hit
AGCGAAAGCAGGTACTGATTCAAAATGGAAGATTTTGTGCGACAATGCTT10.6024096385542169No Hit
TGCATATCTCGGTACCACTAGATTTCCAGTTGCTTCGAATGTTATTTTGT10.6024096385542169No Hit
CCCTAATGATAAGACAGGCAGTTGCGGTCCAGTATCGTCTAATGGAGCAA10.6024096385542169No Hit
CGATTCGGGGGAAAAGAGCATCTCGACGACGTCGTAGTAACGCTGCAGAC10.6024096385542169No Hit
CCTCAGTGAAAGCCCTTAGTAGTATCAAGGTCTCTAATCGGTTAAAGATT10.6024096385542169No Hit
TTACGGCCCTTGGACCGGCCAAAAGTATGGAATATGATGACGATCTAATC10.6024096385542169No Hit
AACATGTACCCTTTCCCTAGTCTTGCCATTTTGTTTGAGAACATTATGGG10.6024096385542169No Hit
TCGACATGCTGAGCACTTCCTGACAATGTGCTAGTATGAACGATTTTCCC10.6024096385542169No Hit
GCTTTGGAGTGTCTGGAGTAAATGAATCAGCTGACATGAGTATTGGCGTA10.6024096385542169No Hit
CCCTTCAATGAAACCGGCAATGGCCCCAAATAGGCCTCTAGATTGAATAG10.6024096385542169No Hit
AAACTATACAAGAAGCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGA10.6024096385542169No Hit
AGGTAAAGAGTTCAACCACCTGGAAAAAAGAATAGAGAATTTAAATAAAA10.6024096385542169No Hit
AACTACAACAGGAAGGGAACAGTGACCTCAGAAGCTGCTTTTGGCCTAGT10.6024096385542169No Hit
GTCACGATCTCTTTAATATGCTTCTTCTCGAGTGAATGGAACACGATGAT10.6024096385542169No Hit
ATCGAACCCTAATGAGCTGTCCTATTGGTGAAGTTCCCTCTCCATACAAC10.6024096385542169No Hit
CCTATCAATGGATCATCAGAAACTGGGAAACTGTTAAAATTCAGTGGTCC10.6024096385542169No Hit
CAATGGATTGGGTGATGCCCCATTCCTTGATCGGCTCCGCCGAGATCAAA10.6024096385542169No Hit
CCCTTGGGTTAAGCGCAACACTTCAATATAAACACTCCCTGTTCCGCCGG10.6024096385542169No Hit
CTCTGGAGCAAAACAAACGATGCTGGATCAGACCGAGTGATGGTATCACC10.6024096385542169No Hit
GTTTGGAGGTTGCCCGTTAGCACTTCTTCTTCTTTCTTGACTGATGATCC10.6024096385542169No Hit
GTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTC10.6024096385542169No Hit
TTTCCTTCTTTAGTACCTAATTCCCTTAGAGGCCTGTACCGTGGGTTTGT10.6024096385542169No Hit
GCCTTCCTGATGTGTACTTTTTGATTATGGCCATATGGTCCACAGTGGTC10.6024096385542169No Hit
CTCTTGTTCTACTTCAAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTT10.6024096385542169No Hit
CTTAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCTCTTTTGAGCTT10.6024096385542169No Hit
AGACAGGAACAGGGTATATTATTTTGACGAGAAAAAGAACACAAACCTCG10.6024096385542169No Hit
ACGGTGTAGCGAACTATTAGAGCACATCCAGAAACTGTTTGCCCACCGGG10.6024096385542169No Hit
CATCTGTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATTCTGTTTT10.6024096385542169No Hit
CTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGG10.6024096385542169No Hit
CACCTAGTTCAGACAATGGAACGTGTTACCCAGGAGATTTCATCGATTAT10.6024096385542169No Hit
GGTGGATGGTTGGTACGGTTTCAGGCATCAAAATTCTGAGGGAAGAGGAC10.6024096385542169No Hit
ATCCAATGTAGGCGCAAGCGAACTTAAACGCAATAAATACGTTGGCTTCA10.6024096385542169No Hit
ATGGGGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGAGGGCTGGATC10.6024096385542169No Hit
TCTTGAAAGAGGAATCCAGCGAGACACTTAGAATGACAATTGCATCTGTA10.6024096385542169No Hit
CCCCAAGACAAGTTCATGGCCCAATCATGACTCGAACAAAGGCGTAACGG10.6024096385542169No Hit
TTCCATTTTCGTGTGGTTTGACTATATAAGGTCTGTCTCTTATACACATC10.6024096385542169No Hit
CAGCATCACTTGGTTGTTTGGGGGGGAGTTGAATTCATATTGCTTGAAAT10.6024096385542169No Hit
ATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTAGTGAC10.6024096385542169No Hit
TTTTCAATTCATTCATCACTTTGCCCTTCATATCTTTATAATCCTGAGAT10.6024096385542169No Hit
GCCTAGGCATGAGCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATG10.6024096385542169No Hit
CAATAAATACGTTGGCTTCAATGTACAGGATGAAGCTCAGGATTATAAAG10.6024096385542169No Hit
ACATTGGATGTCATGATTAAAATCGTATTCCTGAAATCAACTGTTCTGCC10.6024096385542169No Hit
CTTCAGGAATGTGAAGATTCCGTATATTGTATAAGTTTGGTCCTCCATCT10.6024096385542169No Hit
CTATTTGGGGCCATTGCCGGTTTCATTGAAGGGGGGTGGACAGGGATGGT10.6024096385542169No Hit
GTGTAAATGGTTCTTGCTTTACTGTAATGACCGATGGACCAAGTAATGGA10.6024096385542169No Hit
CTATGAGGGCAAAATCATCTGAGGATTGGAGCCCATCCCACCAGTATGTT10.6024096385542169No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers