000000000-C9WWL_l01.4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	000000000-C9WWL_l01.4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7728509
Sequences flagged as poor quality	0
Sequence length	50
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGAGGCGGAGACGGTGAGGCTATACGCACCTT	16491	0.21337880307831691	No Hit
CTGTCTCTTATACACATCTGAGGCGGAGACGGTGCGTTGGTTGCGTGGAG	10221	0.13225060616478548	No Hit
CCTAATTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAA	8834	0.11430406563542851	No Hit
ACCAACAGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAG	7973	0.10316349505447946	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TACGCAC	2065	38.673126	41
TATACGC	2085	38.302162	39
CTATACG	2105	37.93824	38
ATACGCA	2230	36.00897	40
TCGCATA	780	34.410255	40
ACGCACC	2390	33.598324	42
ACGGTGA	2515	32.27833	29
ATCGCAT	835	32.14371	39
GAATCGC	1415	31.872793	25
CGGTAAT	855	31.391813	34
TAGACCG	645	31.03876	4
GACGGTG	4260	30.934273	28
AGACGGT	4290	30.666666	27
CGTTATG	920	30.608696	12
TAGTCGA	670	30.537313	33
CGCTTGA	1755	29.834757	29
ATCGCTT	1780	29.786518	27
CCGGTAA	910	29.494507	33
GTTGCGT	1745	29.249285	40
GTATACG	760	29.236841	44