FastQCFastQC Report
Wed 13 Nov 2019
000000000-C7PW4_l01_n01_S4-joe.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-C7PW4_l01_n01_S4-joe.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2127643
Sequences flagged as poor quality0
Sequence length251
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAGTCC15952.449257E-48.4482765245
ACTCCCC15850.00214193887.7287064245
TCGGGGT21900.0070530346.15296844
CCTCCTT35350.0012122925.19802245
Produced by FastQC (version 0.11.5)