FastQCFastQC Report
Wed 13 Nov 2019
000000000-C7PW4_l01_n01_S3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-C7PW4_l01_n01_S3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1809873
Sequences flagged as poor quality0
Sequence length251
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACAGG15000.020.416666245
CACGGAG5150.00522616714.2718451
AGAGGCG10800.0065876849.0740744
AAGAGTC22100.0077481316.0972853
Produced by FastQC (version 0.11.5)