FastQCFastQC Report
Tue 6 Aug 2019
000000000-C5HTY_l01_n02_FSddRAD2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-C5HTY_l01_n02_FSddRAD2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTT10.8620689655172413No Hit
ACGAAGTCATGATTGAATCGCGAGTGGTCGGCAGATTGCGATAAACGGTC10.8620689655172413No Hit
CGAAAAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATT10.8620689655172413No Hit
CCTTCCCCGTACGCCGGGCAATAATGTTTATGTTGGTTTCATGGTTTGGT10.8620689655172413No Hit
TCTCCAGCCACTTAAGTGAGGTGATTTATGTTTGGTGCTATTGCTGGCGG10.8620689655172413No Hit
CAATACCATGAAAAATATCAACCACACCAGAAGCAGCATCAGTGACGACA10.8620689655172413No Hit
ATATCTGGTTGAACGGCGTCGCGTCGTAACCCAGCTTGGTAAGTTGGATT10.8620689655172413No Hit
TGCTGCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGT10.8620689655172413No Hit
ACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATG10.8620689655172413No Hit
AGCAGCATCAGTGACGACATTAGAAATATCCTTTGCAGTAGCGCCAATAT10.8620689655172413No Hit
AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGC10.8620689655172413No Hit
TCCGAAAGTGTTAACTTCTGCGTCATGGAAGCGATAAAACTCTGCAGGTT10.8620689655172413No Hit
TCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATG10.8620689655172413No Hit
AATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCT10.8620689655172413No Hit
AAACAGGGTCGCCAGCAATATCGGTATAAGTCAAAGCACCTTTAGCGTTA10.8620689655172413No Hit
AGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGG10.8620689655172413No Hit
ATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAG10.8620689655172413No Hit
GTTTTTAGTGAGTTGTTCCATTCTTTAGCTCCTAGACCTTTAGCAGCAAG10.8620689655172413No Hit
GCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATAC10.8620689655172413No Hit
TTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAAATTCGAC10.8620689655172413No Hit
TGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGT10.8620689655172413No Hit
TTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTT10.8620689655172413No Hit
CGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTG10.8620689655172413No Hit
AATCGGTCGTCAGCCAACGTGAGAGTGTCAAAAACGATAAACCAACCATC10.8620689655172413No Hit
CCGCCTACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTT10.8620689655172413No Hit
CAACCAAATCAAGCAACTTATCAGAAACGGCAGAAGTGCCAGCCTGCAAC10.8620689655172413No Hit
TGCCACTCCTCTCCCGACTGTTAACACTACTGGTTATATTGACCATGCCG10.8620689655172413No Hit
TCCACTTCGATTTAATTCGTAAACAAGCAGTAGTAATTCCTGCTTTATCA10.8620689655172413No Hit
TAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTTCATGGTA10.8620689655172413No Hit
AAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGAGAT10.8620689655172413No Hit
GTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAG10.8620689655172413No Hit
GTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGT10.8620689655172413No Hit
CAATAATGTTTATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTACTA10.8620689655172413No Hit
CTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATG10.8620689655172413No Hit
GAGCTGCGCAAGGATAGGTCGAATTTTCTCATTTTCCGCCAGCAGTCCAC10.8620689655172413No Hit
ATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTA10.8620689655172413No Hit
GGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTT10.8620689655172413No Hit
AGTAAAAATGTCTACAGTAGAGTCAATAGCAAGGCCACGACGCAATGGAG10.8620689655172413No Hit
ACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTTTGCCGC10.8620689655172413No Hit
AGCTTGCAGACCCATAATGTCAATAGATGTGGTAGAAGTCGTCATTTGGC10.8620689655172413No Hit
GCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCG10.8620689655172413No Hit
AACTCCTAAGCAGAAAACCTACCGCGCTTCGCTTGGTCAACCCCTCAGCG10.8620689655172413No Hit
AGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCG10.8620689655172413No Hit
TAGCCACATAGAAACCAACAGCCATATAACTGGTAGCTTTAAGCGGCTCA10.8620689655172413No Hit
TTGAATGGCAGATTTAATACCAGCATCACCCATGCCTACAGTATTGTTAT10.8620689655172413No Hit
TGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGG10.8620689655172413No Hit
TCTGATAAGCTGGTTCTCACTTCTGTTACTCCAGCTTCTTCGGCACCTGT10.8620689655172413No Hit
CGACCAATCTGACCAGCAAGGAAGCCAAGATGGGAAAGGTCATGCGGCAT10.8620689655172413No Hit
AATAGTCACGCAAAGCATTGGGATTATCATAAAACGCCTCTAATCGGTCG10.8620689655172413No Hit
CAAGGTTAGTGCTGAGGTTGACTTAGTTCATCAGCAAACGCAGAATCAGC10.8620689655172413No Hit
TAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTA10.8620689655172413No Hit
AACTTGATATTAATAACACTATAGACCACCGCCCCGAAGGGGACGAAAAA10.8620689655172413No Hit
CCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCACATCTAT10.8620689655172413No Hit
CGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTGACGAGTAACAAAG10.8620689655172413No Hit
TCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACT10.8620689655172413No Hit
TGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGAT10.8620689655172413No Hit
CTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATG10.8620689655172413No Hit
GACTTTTATTTCTCGCCATAATTCAAACTTTTTTTCTGATAAGCTGGTTC10.8620689655172413No Hit
ATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCG10.8620689655172413No Hit
TCTTTAATAACCTGATTCAGCGAAACCAATCCGCGGCATTTAGTAGCGGT10.8620689655172413No Hit
TCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACT10.8620689655172413No Hit
GCCGTTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATG10.8620689655172413No Hit
AAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAAT10.8620689655172413No Hit
TATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGC10.8620689655172413No Hit
GATATTTTTCATGGTATTGATAAAGCTGTTGCCGATACTTGGAACAATTT10.8620689655172413No Hit
ATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTC10.8620689655172413No Hit
TGAATGTCACGCTGATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAAC10.8620689655172413No Hit
TGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACA10.8620689655172413No Hit
GTTACTGAGAAGTTAATGGATGAATTGGCACAATGCTACAATGTGCTCCC10.8620689655172413No Hit
GAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACT10.8620689655172413No Hit
TTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATT10.8620689655172413No Hit
TCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACTAACGATTCTGTC10.8620689655172413No Hit
AATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTTCATC10.8620689655172413No Hit
TGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCA10.8620689655172413No Hit
ACGCTCTTTTAAAATGTCAACAAGAGAATCTCTACCATGAACAAAATGTG10.8620689655172413No Hit
GGACAGATTTGTCATTGTGAGCATTTTCATCCCGAAGTTGCGGCTCATTC10.8620689655172413No Hit
AGACATTACATCACTCCTTCTGCACGTAATTTTTGACGCACGTTTTCTTC10.8620689655172413No Hit
CGACCATCCAAAGGATAAACATCATAGGCAGTCGGGAGGGTAGTCGGAAC10.8620689655172413No Hit
TACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGC10.8620689655172413No Hit
GATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTGCTATTCAG10.8620689655172413No Hit
TGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAA10.8620689655172413No Hit
ATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAA10.8620689655172413No Hit
AGGACTGTGTGACTATTGACGTCCTTCCCCGTACGCCGGGCAATAATGTT10.8620689655172413No Hit
CCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTT10.8620689655172413No Hit
AAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTT10.8620689655172413No Hit
GCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCTTATG10.8620689655172413No Hit
CGAAAGTGTTAACTTCTGCGTCATGGAAGCGATAAAACTCTGCAGGTTGG10.8620689655172413No Hit
TATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAA10.8620689655172413No Hit
GCCTTCAAGAAGGTGATAAGCAGGAGAAACATACGAAGGCGCATAACGAT10.8620689655172413No Hit
TTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTT10.8620689655172413No Hit
ACATAAAAAGTAAAAATGTCTACAGTAGAGTCAATAGCAAGGCCACGACG10.8620689655172413No Hit
ATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTT10.8620689655172413No Hit
GGCCCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAG10.8620689655172413No Hit
TGACTCAGGTTATTAAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGT10.8620689655172413No Hit
CTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAACGTGATTACTT10.8620689655172413No Hit
CGCAACCTGTGACGACAAATCTGCTCAAATTTATGCGCGCTGCGATAAAA10.8620689655172413No Hit
CATGAAAACATACAATTGGGAGGGTGTCAATCCTGACGGTTATTTCCTAG10.8620689655172413No Hit
ATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACCACACCAGAAG10.8620689655172413No Hit
TTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGG10.8620689655172413No Hit
CGGCGACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAG10.8620689655172413No Hit
CCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTCAACACTTTCG10.8620689655172413No Hit
TCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCG10.8620689655172413No Hit
TTACTAACACTATAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTA10.8620689655172413No Hit
CCTCAATAGCAGGTTTAAGAGCCTCGATACGCTCAAAGTCAAAATAATCA10.8620689655172413No Hit
GCCTACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGA10.8620689655172413No Hit
GAAAAATTATCTTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTA10.8620689655172413No Hit
ACACCTAAAGCTACATCGTCAACGTTATATTTTGATAGTTTGACGGTTAA10.8620689655172413No Hit
TGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCCAATGCTTTGCGT10.8620689655172413No Hit
TTGGTCGTATGGTTCTTGCTGCCGAGGGTCGCAAGGCTAATGATTCACAC10.8620689655172413No Hit
CGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGCGATTG10.8620689655172413No Hit
GCTACTAAATGCCGCGGATTGGTTTCGCTGAATCAGGTTATTAAAGAGAT10.8620689655172413No Hit
CATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATT10.8620689655172413No Hit
CTAAATTTTTTGCCTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACT10.8620689655172413No Hit
ATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTC10.8620689655172413No Hit
AATTCAGCGGCTTTAACCGGACGCTCGACGCCATTAATAATGTTTTCCGT10.8620689655172413No Hit
TCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGCCTG10.8620689655172413No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers