FastQCFastQC Report
Tue 6 Aug 2019
000000000-C5HTY_l01_n01_FSddRAD8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-C5HTY_l01_n01_FSddRAD8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1008
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGA30.2976190476190476No Hit
CGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGA20.1984126984126984No Hit
TCTGGTTGAACGGCGTCGCGTCGTAACCCAGCTTGGTAAGTTGGATTAAG20.1984126984126984No Hit
TATAACGTTGACGATGTAGCTTTAGGTGTCTGTAAAACAGGTGCCGAAGA20.1984126984126984No Hit
TGACTTTTTGTTAACGTATTTAGCCACATAGAAACCAACAGCCATATAAC20.1984126984126984No Hit
AATCCAAACTTTGTTACTCGTCAGAAAATCGAAATCATCTTCGGTTAAAT20.1984126984126984No Hit
ACTGCAACAACTGAACGGACTGGAAACACTGGTCATAATCATGGTGGCGA20.1984126984126984No Hit
CATACATATCACCATTATCGAACTCAACGCCCTGCATACGAAAAGACAGA20.1984126984126984No Hit
GAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTG20.1984126984126984No Hit
TACACGCAAGGTAAACGCGAACAATTCAGCGGCTTTAACCGGACGCTCGA20.1984126984126984No Hit
CGTCGTAACCCAGCTTGGTAAGTTGGATTAAGCACTCCGTGGACAGATTT20.1984126984126984No Hit
GACCCATAATGTCAATAGATGTGGTAGAAGTCGTCATTTGGCGAGAAAGC20.1984126984126984No Hit
AAGCAATGACGGCAGCAATAAACTCAACAGGAGCAGGAAAGCGAGGGTAT20.1984126984126984No Hit
AAGAAGTCCTTTACCAGCTTTAGCCATAGCACCAGAAACAAAACTAGGGA20.1984126984126984No Hit
TGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGA20.1984126984126984No Hit
GACGGTATAATAACCACCATCATGGCGACCATCCAAAGGATAAACATCAT20.1984126984126984No Hit
GACCATCCAAAGGATAAACATCATAGGCAGTCGGGAGGGTAGTCGGAACC20.1984126984126984No Hit
GCTCGACGCCATTAATAATGTTTTCCGTAAATTCAGCGCCTTCCATGATG20.1984126984126984No Hit
CAATAGCAAGGCCACGACGCAATGGAGAAAGACGGAGAGCGCCAACGGCG20.1984126984126984No Hit
AACAAAAAGTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGA20.1984126984126984No Hit
TGCCACCGGAGGCGGCTTTTTGACCGCCTCCAAACAATTTAGACATGGCG20.1984126984126984No Hit
ATTAGAGCCAATACCATCAGCTTTACCGTCTTTCCAGAAATTGTTCCAAG20.1984126984126984No Hit
ATTATCGAACTCAACGCCCTGCATACGAAAAGACAGAATCTCTTCCAAGA20.1984126984126984No Hit
GGTATAAGTCAAAGCACCTTTAGCGTTAAGGTACTGAATCTCTTTAGTCG20.1984126984126984No Hit
TTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGC20.1984126984126984No Hit
ATGAAGTAATCACGTTCTTGGTCAGTATGCAAATTAGCATAAGCAGCTTG20.1984126984126984No Hit
AGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGCCGTCTTCATTTC20.1984126984126984No Hit
TCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTACTACTGCTTG20.1984126984126984No Hit
GACCAAAATTAGGGTCAACGCTACCTGTAGGAAGTGTCCGCATAAAGTGC20.1984126984126984No Hit
CAGGCCACAACCAACCAGAACGTGAAAAAGCGTCCTGCGTGTAGCGAACT20.1984126984126984No Hit
GTTTGGTCAGTTCCATCAACATCATAGCCAGATGCCCAGAGATTAGAGCG20.1984126984126984No Hit
CTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCC20.1984126984126984No Hit
AAGCGTCCTGCGTGTAGCGAACTGCGATGGGCATACTGTAACCATAAGGC20.1984126984126984No Hit
CAAAGTCAAAATAATCAGCGTGACATTCAGAAGGGTAATAAGAACGAACC20.1984126984126984No Hit
GGATGAAAATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAA20.1984126984126984No Hit
ATGAACTTAATCCACTGTTCACCATAAACGTGACGATGAGGGACATAAAA20.1984126984126984No Hit
CTTCATGAACTTAATCCACTGTTCACCATAAACGTGACGATGAGGGACAT20.1984126984126984No Hit
AACCTGATTCAGCGAAACCAATCCGCGGCATTTAGTAGCGGTAAAGTTAG20.1984126984126984No Hit
TCTACAGTAGAGTCAATAGCAAGGCCACGACGCAATGGAGAAAGACGGAG20.1984126984126984No Hit
TATCAGCACCAACAGAAACAACCTGATTAGCGGCGTTGACAGATGTATCC20.1984126984126984No Hit
ATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCAGGAATTACTACTGC20.1984126984126984No Hit
TGTTCGTTTTCCGCCTACTGCGACTAAAGAGATTCAGTACCTTAACGCTA20.1984126984126984No Hit
GAATGCCACCGGAGGCGGCTTTTTGACCGCCTCCAAACAATTTAGACATG20.1984126984126984No Hit
GCGGCACAGAATGTTTATAGGTCTGTTGAACACGACCAGAAAACTGGCCT20.1984126984126984No Hit
TTAACAAAAAGTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAA20.1984126984126984No Hit
AAGGCCACGTATTTTGCAAGCTATTTAACTGGCGGCGATTGCGTACCCGA20.1984126984126984No Hit
AGTCAGATATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAAC20.1984126984126984No Hit
TAACTGGTAGCTTTAAGCGGCTCACCTTTAGCATCAACAGGCCACAACCA20.1984126984126984No Hit
AACGCTGCATGAAGTAATCACGTTCTTGGTCAGTATGCAAATTAGCATAA20.1984126984126984No Hit
CGCGGCGGCAAGTTGCCATACAAAACAGGGTCGCCAGCAATATCGGTATA20.1984126984126984No Hit
TGAAACAAATGCTTAGGGATTTTATTGGTATCAGGGTTAATCGTGCCAAG20.1984126984126984No Hit
GGGAGAGGAGTGGCATTAACACCATCCTTCATGAACTTAATCCACTGTTC20.1984126984126984No Hit
GGCGTTATAACCTCACACTCAATCTTTTATCACGAAGTCATGATTGAATC20.1984126984126984No Hit
TGAAGACGGCCATTAGCTGTACCATACTCAGGCACACAAAAATACTGATA20.1984126984126984No Hit
ACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATT20.1984126984126984No Hit
AAGGAGTGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTG20.1984126984126984No Hit
ATTGGGATTATCATAAAACGCCTCTAATCGGTCGTCAGCCAACGTGAGAG20.1984126984126984No Hit
AAAATTAGGGTCAACGCTACCTGTAGGAAGTGTCCGCATAAAGTGCACCG20.1984126984126984No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)