FastQCFastQC Report
Fri 19 Oct 2018
000000000-BNG4D_l01_n02_mldna_daplib_dapv2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-BNG4D_l01_n02_mldna_daplib_dapv2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1828452
Sequences flagged as poor quality0
Sequence length76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCCGG1300.00229149416.15384741
TCTACGT3652.5089108E-49.58904156
GTGTAGG24450.09.16155470
AGCGTCG44850.08.81828370
CGTGTAG24100.08.42323769
GTCGTGT31000.08.12903270
TGTAGGG20350.08.08353870
GAGCGTC49800.08.01204969
CGTCGTG37000.07.851351770
CCGATAA4100.0076043417.68292769
GGGAAAG16100.07.60869569
TAGGGAA18400.07.41847870
TCGTGTA28400.07.394366369
GTAGGGA18050.07.368420669
GCGTCGT39750.07.308176569
AGAGCGT55900.07.200357468
GTAGGCT6056.536558E-46.942148770
GGAAAGA20500.06.82926870
AAGAGCG63950.06.62236170
GAACTGG7055.225386E-46.45390036
Produced by FastQC (version 0.11.5)