FastQCFastQC Report
Fri 19 Oct 2018
000000000-BNG4D_l01_n02_abdna_daplib_dapv2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-BNG4D_l01_n02_abdna_daplib_dapv2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1727335
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG3501.3603272E-511.070
TGTAGGC7051.195076E-99.43262570
GAGTGTA11950.09.07949769
AGTGTAG12300.08.82113870
CTGTGGG3200.0088759588.7544
GTAGGGA35250.08.63829870
GTGTAGG49900.08.20641270
TCGAAGC4350.00144092498.04597810
AAGAGTG20900.08.03827770
TCGTGTA54600.08.01282170
CCGAACA3950.0054441117.97468442
GCTATAG4450.00180279947.865168670
TGTAGGG39050.07.70806769
AGAGTGT16350.07.492355368
GTCGTGT59400.07.483165369
TAGGGAA33350.07.451274470
CGTGTAG48000.07.29166769
AGGGAAA33500.07.208955370
CGTCGTG68450.06.953981470
GGGAAAG28200.06.826241569
Produced by FastQC (version 0.11.5)