FastQCFastQC Report
Fri 19 Oct 2018
000000000-BNG4D_l01_n01_abdna_daplib_dapv2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-BNG4D_l01_n01_abdna_daplib_dapv2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1727335
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCAGTC16000.010.062570
CTCCAGT18400.09.13043469
CAGTCAC12000.09.04166769
ACTCCAG20650.08.9830570
AGTCACT12000.08.45833470
CCAGTCA14650.08.36177470
CACGTCT58250.08.111588570
TCTGAAC38100.07.99212670
CGTCTGA45700.07.964988770
GTCACTC8151.3947465E-77.73006169
TCTCGCG5108.1995904E-47.5490269
ACACGTC63300.07.46445569
ACGTCTG49600.07.409274669
GTCTGAA43850.07.343215570
TGAACTC33350.07.13643270
CACACGT69800.07.120343770
CTGAACT33550.06.989567869
GAACTCC28050.06.98752270
AACTCCA29450.06.655348370
GCACACG75400.06.59151269
Produced by FastQC (version 0.11.5)