Basic Statistics
Measure | Value |
---|---|
Filename | 000000000-BMH75_l01_n02_undetermined.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2269883 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACAACGA | 20 | 7.03474E-4 | 45.000004 | 30 |
GATAACT | 20 | 7.03474E-4 | 45.000004 | 26 |
GAAGATC | 20 | 7.03474E-4 | 45.000004 | 24 |
GCGGTGA | 20 | 7.03474E-4 | 45.000004 | 30 |
CCGGATC | 35 | 1.2126293E-7 | 45.000004 | 24 |
GGCCGAG | 20 | 7.03474E-4 | 45.000004 | 10 |
TAAGTGC | 20 | 7.03474E-4 | 45.000004 | 25 |
ACTTATG | 20 | 7.03474E-4 | 45.000004 | 30 |
ACGATAT | 20 | 7.03474E-4 | 45.000004 | 12 |
AGTGATC | 20 | 7.03474E-4 | 45.000004 | 24 |
GTTCGCC | 20 | 7.03474E-4 | 45.000004 | 34 |
CATAGGG | 35 | 1.2126293E-7 | 45.000004 | 24 |
CTCGGGT | 20 | 7.03474E-4 | 45.000004 | 17 |
CTCGGGG | 20 | 7.03474E-4 | 45.000004 | 17 |
GAGCGAA | 20 | 7.03474E-4 | 45.000004 | 34 |
CACAGAT | 20 | 7.03474E-4 | 45.000004 | 23 |
TCGTATA | 20 | 7.03474E-4 | 45.000004 | 18 |
CCCCAGG | 20 | 7.03474E-4 | 45.000004 | 23 |
CGGCTTA | 40 | 6.8193913E-9 | 45.000004 | 25 |
CGTCGAT | 20 | 7.03474E-4 | 45.000004 | 23 |